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2
votes
5
replies
5.0k
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unlist doesn't work for IRanges
iranges
updated 6.0 years ago by 65k • written 6.0 years ago by ▴ 450
0
votes
2
replies
5.0k
views
Comment: C: unlist doesn't work for IRanges
6.0 years ago li lilingdu ▴ 450
2
votes
1
reply
952
views
Question about parallel manipulation on CharacterList objects
s4vectors IRanges
updated 7.7 years ago by 25k • written 7.7 years ago by ▴ 450
0
votes
1
reply
2.3k
views
Answer: A: unused argument (organism="human")
7.7 years ago li lilingdu ▴ 450
0
votes
1
reply
2.3k
views
Comment: C: Gviz: How to control `grid` parameter and how to add horizontal lines with diffe
7.7 years ago li lilingdu ▴ 450
1
vote
0
replies
2.3k
views
Comment: C: Gviz: How to control `grid` parameter and how to add horizontal lines with diffe
7.7 years ago li lilingdu ▴ 450
2
votes
2
replies
2.3k
views
Answer: A: Gviz: How to control `grid` parameter and how to add horizontal lines with diffe
7.7 years ago li lilingdu ▴ 450
2
votes
0
replies
1.8k
views
Answer: A: Howto: View Pileup or Base level stats in R using Rsamtools or rbamtools
7.7 years ago li lilingdu ▴ 450
0
votes
0
replies
4.6k
views
Answer: A: Gviz Color Filling
7.7 years ago li lilingdu ▴ 450
0
votes
0
replies
853
views
After mapping one Sanger sequence read (about 900bp) to hg19 using blastn, How can I get variants presented as reference-based position and base ch…
Biostrings blast variantannotation
7.8 years ago li lilingdu ▴ 450
3
votes
3
replies
1.3k
views
Genes found on particular chromosome using two methods in TxDb.Hsapiens.UCSC.hg19.knownGene were not identical
txdb.hsapiens.ucsc.hg19.knowngene txdb
updated 7.8 years ago by 25k • written 7.8 years ago by ▴ 450
0
votes
0
replies
1.3k
views
Comment: A: Genes found on particular chromosome using two methods in TxDb.Hsapiens.UCSC.hg
updated 7.8 years ago by 25k • written 7.8 years ago by ▴ 450
0
votes
0
replies
1.3k
views
Comment: A: Genes found on particular chromosome using two methods in TxDb.Hsapiens.UCSC.hg
7.8 years ago li lilingdu ▴ 450
2
votes
1
reply
1.3k
views
Answer: A: GRanges get hits from (only) antisense strand with findOverlaps().
7.8 years ago li lilingdu ▴ 450
0
votes
0
replies
993
views
Genetic Association analysis using four siblings among which three were affected and one was normal
genetics plink linkage disequilibrium
7.9 years ago li lilingdu ▴ 450
0
votes
0
replies
1.3k
views
RE : Question about translate funciton in Biostrings package
Organism Biostrings Organism Biostrings
13.2 years ago li lilingdu ▴ 450
0
votes
2
replies
1.7k
views
Question about translate funciton in Biostrings package
updated 13.2 years ago by 16k • written 13.2 years ago by ▴ 450
0
votes
1
reply
1.3k
views
Help about 'pairwiseAlignment' in Biostrings package
Alignment Biostrings Alignment Biostrings
updated 13.2 years ago by 16k • written 13.2 years ago by ▴ 450
0
votes
1
reply
926
views
Question about subtracks shown using ‘rtracklayer’ package
updated 13.6 years ago by ★ 11k • written 13.6 years ago by ▴ 450
0
votes
1
reply
955
views
a little error in 'rtracklayer' vignette
updated 14.7 years ago by ▴ 620 • written 14.7 years ago by ▴ 450
0
votes
1
reply
963
views
browserView does not work in 'rtracklayer' [failure to coerce "CompressedIntegerList"]
updated 14.7 years ago by ▴ 620 • written 14.7 years ago by ▴ 450
0
votes
3
replies
1.3k
views
can not coerce CompressedIntegerList to vector or integer in 'IRanges' package
updated 14.7 years ago by ★ 1.6k • written 14.7 years ago by ▴ 450
0
votes
1
reply
765
views
(no subject)
rtracklayer IRanges rtracklayer IRanges
updated 14.7 years ago by ★ 1.6k • written 14.7 years ago by ▴ 450
0
votes
1
reply
813
views
"rtracklayer" is not compatible with the lateset "IRanges" package
updated 14.7 years ago by ▴ 620 • written 14.7 years ago by ▴ 450
0
votes
3
replies
1.1k
views
problem about using 'rtracklayer' package to retrieve SNP chromosome position
rtracklayer rtracklayer
updated 14.8 years ago by ▴ 620 • written 14.9 years ago by ▴ 450
0
votes
0
replies
942
views
problem about using 'rtracklayer' to retrieve chromosome position of SNPs
rtracklayer rtracklayer
14.9 years ago li lilingdu ▴ 450
0
votes
1
reply
1.1k
views
examples of "ucscTableQuery" in "rtracklayer" does not work
updated 14.9 years ago by ▴ 620 • written 14.9 years ago by ▴ 450
0
votes
0
replies
831
views
Answer: A: examples of
14.9 years ago li lilingdu ▴ 450
0
votes
1
reply
831
views
examples of
14.9 years ago li lilingdu ▴ 450
0
votes
0
replies
1.1k
views
error when using trackNames function in rtracklayer
14.9 years ago li lilingdu ▴ 450
0
votes
2
replies
2.1k
views
merging (Combining) microarray datasets on different platforms
Microarray Normalization Microarray Normalization
updated 14.9 years ago by ▴ 420 • written 14.9 years ago by ▴ 450
0
votes
1
reply
1.1k
views
sequences seemed to be not correctly cataloged in package "pd.genomewidesnp.6"
updated 15.4 years ago by 6.7k • written 15.4 years ago by ▴ 450
0
votes
1
reply
553
views
help about hybirization data of Illumina BeadArray Genotyping Chip
beadarray beadarray
updated 15.4 years ago by 21k • written 15.4 years ago by ▴ 450
0
votes
0
replies
1.4k
views
'Error in shell.exec(url) : file name conversion problem' in rtracklayer package
15.5 years ago li lilingdu ▴ 450
0
votes
0
replies
741
views
Problem about using functions in RCurl to download a zipped file
15.5 years ago li lilingdu ▴ 450
0
votes
0
replies
712
views
Problem about using functions in RCurl to download a zipped file
15.5 years ago li lilingdu ▴ 450
0
votes
1
reply
948
views
Questions about using "xyplot" and plot device function such as "jpeg"
updated 15.7 years ago by ▴ 340 • written 15.7 years ago by ▴ 450
0
votes
1
reply
866
views
Problem in using "rtracklayer' package
updated 15.8 years ago by ▴ 620 • written 15.8 years ago by ▴ 450
0
votes
0
replies
749
views
Question about "structure_exon_chrom_end" attributes in biomaRt
biomaRt biomaRt
15.8 years ago li lilingdu ▴ 450
0
votes
2
replies
1.0k
views
About ArrayExpress MAGE-TAB tools
Microarray GEOquery ArrayExpress Microarray GEOquery ArrayExpress
updated 16.0 years ago by ▴ 280 • written 16.0 years ago by ▴ 450
0
votes
1
reply
5.8k
views
Problems about list files on a FTP site
updated 16.0 years ago by 25k • written 16.0 years ago by ▴ 450
0
votes
3
replies
1.1k
views
Questions about Disease Progression Analysis
Microarray Microarray
16.0 years ago li lilingdu ▴ 450
0
votes
1
reply
1.1k
views
Answer: A: Questions about Disease Progression Analysis
16.0 years ago li lilingdu ▴ 450
0
votes
1
reply
734
views
problems about XML dtd entity
updated 16.0 years ago by 25k • written 16.0 years ago by ▴ 450
0
votes
9
replies
1.8k
views
problems loading the Rgraphviz package
Rgraphviz Rgraphviz
updated 16.0 years ago by 25k • written 16.0 years ago by ▴ 450
0
votes
1
reply
645
views
probelm of column names when using biomaRt
updated 16.6 years ago by ▴ 500 • written 16.6 years ago by ▴ 450
0
votes
1
reply
677
views
problems with command "download.file"
updated 16.7 years ago by ▴ 140 • written 16.7 years ago by ▴ 450
0
votes
1
reply
553
views
problem when using "humanCHRLOC"
updated 17.2 years ago by ▴ 870 • written 17.2 years ago by ▴ 450
0
votes
0
replies
348
views
some questions about "humanCHRLOC"
17.2 years ago li lilingdu ▴ 450
0
votes
0
replies
448
views
the mm argument for function "buildCdfEnv.matchprobes" in "altcdfenvs" package
17.7 years ago li lilingdu ▴ 450
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