Performing DGE analysis with MAST on a variable with more than 2 levels
0
0
Entering edit mode
zroger499 • 0
@zroger499-23414
Last seen 3 months ago
Portugal

Hello!

I'm trying to perform a differential expression on a single cell dataset using MAST. My dataset has individuals with 3 experimental conditions (A, B and C). I'm only interested in the differences between A and C for now. However, since my sample size is very modest I was looking into also including the data from individuals with B. I know this is possible with other DGE packages like DESeq2 and edgeR, but with MAST I'm not able to find a solution in the manual. Is this a supported feature?

Many thanks

MAST DEG SingleCell • 724 views
ADD COMMENT

Login before adding your answer.

Traffic: 562 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6