Bioconductor DEGseq

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limma DEGseq

updated 12 weeks ago by James W. MacDonald 65k • written 12 weeks ago by mia • 0

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RNASeqData DEGseq

updated 9 months ago by ATpoint ★ 4.1k • written 9 months ago by sybyun419 • 0

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DEGseq RNASeqData limma

updated 11 months ago by Gordon Smyth 50k • written 11 months ago by Shaimaa Gamal • 0

3 results • Page 1 of 1

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Comment: Help with ENmix readidat by James W. MacDonald 65k

Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …

Comment: LRT, more than two conditions and pairwise comparisons by James W. MacDonald 65k

In that case, probably easiest to subset to the groups being compared.

Comment: Help with ENmix readidat by minardsmitha ▴ 10

Did you figure this out? I have the same issue.

Comment: LRT, more than two conditions and pairwise comparisons by boczniak767 ▴ 720

Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …

Comment: DESeq2- Mysterious interaction suppresses DEGs by Michael Love 42k

We have some text about this particular question in the Frequently Asked Questions (FAQ) part of the software vignette.

Votes

Answer: Subsetting RNAseq data | voomaByGroup()

biomaRt not working - lazy table error

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