Bioconductor DNAMethylation

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361

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DNAMethylation limma methylationArrayAnalysis

4 weeks ago • updated 24 days ago hortense96 • 0

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363

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DNAMethylation AnnotationHub EPICv2manifest annotation

updated 5 weeks ago by Tim Peters ▴ 180 • written 6 weeks ago by s.malik • 0

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104

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DNAMethylation DMRcate

6 weeks ago Macsue • 0

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189

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DNAMethylation cfMeDIP-seq cfDNA qsea

updated 8 weeks ago by Simon Pearce • 0 • written 3 months ago by User3088 • 0

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283

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DNAMethylation GO MethylationArray missMethyl EPICv2

updated 10 weeks ago by belinda.phipson ▴ 40 • written 10 weeks ago by s.malik • 0

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2.2k

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DNAMethylation ChAMP

updated 12 weeks ago by sup0903 • 0 • written 3.4 years ago by Hongbii • 0

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477

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DNAMethylation EPICv2 IlluminaHumanMethylationEPICmanifest

updated 12 weeks ago by James W. MacDonald 65k • written 12 weeks ago by rae.alshammari ▴ 10

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440

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DNAMethylation limmaGUI biostatistics limma

updated 3 months ago by Gordon Smyth 50k • written 3 months ago by Jitendra ▴ 10

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503

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DNAMethylation MethylationArray methylationArrayAnalysis illumina

3 months ago mikat • 0

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514

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DNAMethylation missMethyl Pathways

12 months ago Grace • 0

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1.1k

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DNAMethylation methylationArrayAnalysis DMRcate MethylationArrayData MethylationArray

updated 12 months ago by Tim Peters ▴ 180 • written 12 months ago by Grace • 0

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983

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DNAMethylation missMethyl

updated 14 months ago by belinda.phipson ▴ 40 • written 14 months ago by Joana • 0

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550

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DNAMethylation wateRmelon Computation minfi

21 months ago calen.p.ryan • 0

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1.4k

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DNAMethylation QSEA MEDIP

2.9 years ago rtrivedi1 ▴ 10

14 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180