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Normalization and background correction issues for specific Illumina data sets using limma R package
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Recent ...
Replies
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
•
0
That ll be helpful. Thank you.
Comment: Log-cpm values from limma
by
Shaimaa Gamal
•
0
I have performed RUVg correction and extracted W, factors of unwanted variation.
According to limma guide,
> In the limma approach
to RNA…
Comment: DSS CpG coverage threshold
by
j.gilbert
•
0
Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says:
*Q: Do I need to filter out…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Segmentation is of the whole genome, I'll write some code for doing this later today.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
I'll take a look later.
For next time, I've edited your post by enclosing the code in triple backticks (on their own link). This properly …
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