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Showing :
EnhancedVolcano
•
reset
1
vote
6
replies
22k
views
Log2FC data type error in EnhansedVolcano package
software error
enhancedvolcano
4.6 years ago
sauuyer
▴ 10
0
votes
8
replies
12k
views
How to generate a volcano plot when p-values from DESeq2 are zero?
deseq2
pvalue
visualization
enhancedvolcano
rnaseq
updated 5.3 years ago by
Michael Love
42k • written 5.3 years ago by
ricardo3889
• 0
7
votes
8
replies
6.5k
views
Warning in EnhancedVolcano plot
volcano-plot
EnhancedVolcano
updated 3.0 years ago by
Kevin Blighe
★ 3.9k • written 3.1 years ago by
Assa Yeroslaviz
★ 1.5k
2
votes
1
reply
5.1k
views
EnhancedVolcano Label Question
RNASeq
EnhancedVolcano
DEGs
updated 2.9 years ago by
Kevin Blighe
★ 3.9k • written 2.9 years ago by
robledoj13
• 0
5
votes
4
replies
4.9k
views
ylim and xlim in Enhanced Volcano
DESeq2
EnhancedVolcano
Bioconductor
updated 2.7 years ago by
Kevin Blighe
★ 3.9k • written 2.7 years ago by
Rachel
• 0
2
votes
6
replies
4.0k
views
How can I use geom_label_repel with EnhancedVolcano?
ggrepel
RNASeq
R
EnhancedVolcano
2.8 years ago
Loren
▴ 10
1
vote
4
replies
4.0k
views
EnhancedVolcano plot with colCustom
EnhancedVolcano
3.1 years ago
Neeraja Vegesna
▴ 10
6
votes
8
replies
3.6k
views
Jitter p-values in volcano plot
EnhancedVolcano
DESeq2
updated 3.5 years ago by
Michael Love
42k • written 3.5 years ago by
philipp.rewe
▴ 20
1
vote
8
replies
3.4k
views
Problem selectively labelling points in the Enhanced Volcano package
EnhancedVolcano
3.4 years ago
Peter
▴ 10
0
votes
20
replies
3.2k
views
pointSize, labSize, and DrawConnectors error when plotting EnhancedVolcano
EnhancedVolcano
3.7 years ago • updated 3.4 years ago
knholm
• 0
4
votes
2
replies
2.8k
views
enhancedVolcano: Why are only a few of my select labels showing up?
enha
EnhancedVolcano
3.5 years ago
noahhelton98
▴ 20
4
votes
7
replies
2.6k
views
visualize significant upregultaed genes and downregultaed genes with different colors (EnhancedVolcano)
enhancedvolcano
updated 3.7 years ago by
Kevin Blighe
★ 3.9k • written 3.7 years ago by
gaom001
▴ 10
3
votes
5
replies
2.5k
views
Print EnhancedVolcano Plot as jpeg or similar in R Notebook
EnhancedVolcano
updated 24 months ago by
Kevin Blighe
★ 3.9k • written 24 months ago by
Bine
▴ 40
0
votes
6
replies
2.3k
views
How to change all text, including point labels to Arial?
EnhancedVolcano
updated 23 months ago by
James W. MacDonald
65k • written 23 months ago by
junli1988
• 0
0
votes
1
reply
2.2k
views
Increase text size of axis labels in EnhancedVolcano
EnhancedVolcano
updated 3.7 years ago by
Kevin Blighe
★ 3.9k • written 3.7 years ago by
knholm
• 0
1
vote
1
reply
2.2k
views
Enhanced Volcano Plot Controlling Color Layers
EnhancedVolcano
3.1 years ago
dk0319
• 0
2
votes
4
replies
2.1k
views
EnhancedVolcano legendPosition error
EnhancedVolcano
updated 18 months ago by
elefth.pavlos
▴ 40 • written 18 months ago by
Allison
• 0
3
votes
5
replies
2.1k
views
Volcano plot - select additional gene
EnhancedVolcano
RNASeqR
R
volcanoplot
updated 3.6 years ago by
Kevin Blighe
★ 3.9k • written 3.6 years ago by
camillab.
▴ 10
6
votes
9
replies
2.0k
views
How to better design a Volcano plot
EnhancedVolcano
updated 3.3 years ago by
Kevin Blighe
★ 3.9k • written 3.3 years ago by
suxxa
▴ 20
0
votes
5
replies
1.9k
views
EnhancedVolcano plot - labels
EnhancedVolcano
updated 2.7 years ago by
Kevin Blighe
★ 3.9k • written 2.7 years ago by
Johannes
• 0
4
votes
5
replies
1.8k
views
EnhancedVolcano - Unable to customize the length of Connectors to Gene Labels
Transcriptomics
EnhancedVolcano
updated 13 months ago by
Kevin Blighe
★ 3.9k • written 13 months ago by
Peter
▴ 20
1
vote
12
replies
1.7k
views
EnhancedVolcano - highlight specific points by changing shape
enhancedvolcano
updated 3.7 years ago by
Kevin Blighe
★ 3.9k • written 3.7 years ago by
n.tear
▴ 20
0
votes
1
reply
1.6k
views
Enhanced Volcano Error when drawing connectors
EnhancedVolcano
updated 19 months ago by
Kevin Blighe
★ 3.9k • written 19 months ago by
deena.maurer
• 0
1
vote
4
replies
1.6k
views
Issue with selectively labelling genes in the Enhanced Volcano package
EnhancedVolcano
updated 2.3 years ago by
Kevin Blighe
★ 3.9k • written 2.3 years ago by
Jonathan
▴ 10
0
votes
2
replies
1.6k
views
ERROR installing EnhancedVolcano in R4.1
EnhancedVolcano
updated 2.6 years ago by
Kevin Blighe
★ 3.9k • written 2.6 years ago by
Raj
• 0
1
vote
3
replies
1.6k
views
Enhancedvolcano labels superimposed on points
EnhancedVolcano
updated 2.4 years ago by
Kevin Blighe
★ 3.9k • written 2.4 years ago by
acharest
• 0
0
votes
5
replies
1.3k
views
Italicise
EnhancedVolcano
updated 23 months ago by
Kevin Blighe
★ 3.9k • written 24 months ago by
Pau
• 0
0
votes
4
replies
1.1k
views
enhanced volcano , different -log10pvalue of the same gene
EnhancedVolcano
RNASeqData
DifferentialExpression
12 months ago
ruba-mahmoud
• 0
1
vote
1
reply
1.1k
views
Issue with lengthConnectors in EnhancedVolcano
EnhancedVolcano
updated 4 months ago by
mohamad.hajo89
• 0 • written 2.4 years ago by
ikotlar
▴ 10
2
votes
2
replies
1.0k
views
Overlay points with EnhancedVolcano R
EnhancedVolcano
updated 14 months ago by
Kevin Blighe
★ 3.9k • written 14 months ago by
redafazazi
• 0
0
votes
2
replies
990
views
Unable to over/ride colour scheme with custom key-value pairs
EnhancedVolcano
updated 19 months ago by
Kevin Blighe
★ 3.9k • written 19 months ago by
patrirodry85
• 0
0
votes
2
replies
886
views
Is it possible for the legend labels to be different from the Colcustom names?
EnhancedVolcano
enha
18 months ago
elefth.pavlos
▴ 40
0
votes
0
replies
877
views
Plotting Upregulated and down regulated genes in different colour
EnhancedVolcano
2.2 years ago
Somenath
• 0
0
votes
3
replies
874
views
Enhanced volcanoplots from DESeq2
EnhancedVolcano
updated 4.1 years ago by
Michael Love
42k • written 4.1 years ago by
rimss.khurana
• 0
0
votes
3
replies
867
views
change a column within a DESeq results object
EnhancedVolcano
updated 23 months ago by
Guido Hooiveld
★ 4.0k • written 23 months ago by
Matt
• 0
0
votes
0
replies
712
views
EnhancedVolcano, coloring of a subset of labels
EnhancedVolcano
2.5 years ago
bradyb
• 0
0
votes
2
replies
587
views
Only display positive FC on volcano plot
EnhancedVolcano
updated 14 months ago by
Kevin Blighe
★ 3.9k • written 14 months ago by
Tanner
• 0
0
votes
1
reply
505
views
Error in names(label_color[label_color == "organe"]) <- "lysosome" : 'names' attribute [1] must be the same length as the vector [0]
EnhancedVolcano
updated 13 months ago by
elefth.pavlos
▴ 40 • written 13 months ago by
Phương Thùy
• 0
0
votes
2
replies
488
views
EnhancedVolcano with labels based on log2 Fold Change
EnhancedVolcano
written 5 months ago by
sara.jacobson
• 0
0
votes
0
replies
478
views
MetaVolcanoR usage
limma
MetaVolcanoR
EnhancedVolcano
22 months ago
JAcky
• 0
1
vote
7
replies
355
views
Math expression in shapeCustom legend in EnhancedVolcano
EnhancedVolcano
21 days ago • updated 20 days ago
pl23
• 0
41 results • Page
1 of 1
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
by
BioinfGuru
▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
makala
• 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
Erik Wright
▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
by
Matthew Thornton
▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
Votes
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
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