Showing : Install • reset
8
votes
7
replies
1.8k
views
RMySQL availiability with Bioconductor 3.0
Install RMySQL Windows
updated 9.7 years ago by 25k • written 9.7 years ago by ▴ 30
7
votes
2
replies
4.5k
views
Help in installing certain pacakges
software error install
updated 3.8 years ago by 25k • written 3.8 years ago by ▴ 40
6
votes
2
replies
1.7k
views
Is there a way to tell biocLite() to install a Bioconductor package only if it is not installed already?
bioclite package installation installation install
updated 6.3 years ago by ★ 6.5k • written 6.3 years ago by ▴ 10
5
votes
4
replies
2.7k
views
XVector installation fails because zlib.h is not found
XVector docker Install
2.5 years ago RobKo ▴ 10
5
votes
18
replies
7.6k
views
Install DESeq2 problem for macbook pro M1 Max
Bioconductor Install DESeq2
updated 5 months ago by • 0 • written 2.3 years ago by • 0
4
votes
2
replies
4.2k
views
Install package without updating dependent package
Install AnnotationForge
2.4 years ago 亮 • 0
4
votes
9
replies
1.9k
views
HELP! Troubleshooting Installing EBImage Package
Install CAMERA insta PackageType
updated 3.5 years ago by ▴ 750 • written 3.5 years ago by • 0
4
votes
5
replies
1.4k
views
Installing DESeq2 fails ; R can't find basic commands like 'rm' and 'mv'
deseq2 install software error
3.8 years ago mja18 ▴ 40
3
votes
2
replies
6.8k
views
errors when installing cummeRbund package
Install cummerbund Rcurl xml
updated 9.7 years ago by 25k • written 9.7 years ago by ▴ 20
3
votes
2
replies
5.6k
views
problem installing "vsn" on debian... gcc: error: unrecognized command line option -fstack-protector-strong
install vsn gcc debian
9.3 years ago regcl • 0
3
votes
5
replies
10k
views
installing synapter package: package is not available for Bioconductor version '3.14'
synapter Install
2.2 years ago czan ▴ 10
3
votes
5
replies
1.2k
views
why is downloading the .tar.gz file for a given bioconductor package, then installing with R CMD INSTALL so much more effective than BiocManager::ins…
Bioconductor Install library biocmanager
updated 10 months ago by 6.7k • written 10 months ago by ▴ 20
2
votes
2
replies
1.0k
views
rtracklayer S.h
install
2.0 years ago gibran • 0
2
votes
1
reply
3.8k
views
Bioconductor Package Installation
install TxDb.Hsapiens.UCSC.hg38.knownGene
2.2 years ago Theresa ▴ 20
2
votes
1
reply
849
views
Problem with pd.hta.2.0 package installation
Install
updated 3.2 years ago by 65k • written 3.2 years ago by • 0
2
votes
4
replies
2.7k
views
BiocManager::install() does not work anymore
Install PackageType
updated 2.6 years ago by 3.9k • written 2.6 years ago by • 0
2
votes
6
replies
36k
views
Installing Bioclite.R Package
Bioclite install
8.5 years ago louiseapps2 • 0
2
votes
2
replies
1.4k
views
BiomaRT URLs down? 404 Not Found
biomart bioconductor support.bioconductor.org biocinstaller install
6.3 years ago n.pantelireis16 • 0
2
votes
4
replies
2.2k
views
question regarding installation of "enrichplot" with BiocManager
R BiocManager install clusterProfiler GO
written 17 months ago by • 0
2
votes
5
replies
990
views
SparseArray unable to install on Bioc 3.18
DESeq2 SummarizedExperiment SparseArray Install DelayedArray
updated 6 months ago by 42k • written 6 months ago by • 0
1
vote
3
replies
1.3k
views
Bioconductor installation error
Install
updated 2.1 years ago by • 0 • written 2.1 years ago by ▴ 10
1
vote
2
replies
2.1k
views
Installation of "xps" on windows 7 : error message
xps windows 7 Install
updated 9.7 years ago by ★ 3.9k • written 9.7 years ago by • 0
1
vote
1
reply
5.0k
views
Problems installing S4Vectors using Bioconductor version 3.0 (BiocInstaller 1.16.5), R version 3.2.1.
install installation biocinstaller
8.9 years ago tresch • 0
1
vote
1
reply
2.7k
views
installing GO.db on windows 64x
go install
updated 8.6 years ago by 65k • written 8.6 years ago by • 0
1
vote
5
replies
3.7k
views
Can't Download DESeq2 Package (Ubuntu 20.04; R 4.0.1; BioConductor 3.11)
deseq2 install r4.0 bioconductor3.11 ubuntu20.04
3.9 years ago ruwaa.ibrahem • 0
1
vote
3
replies
6.7k
views
problem in installing Bio conductor package
bioconductorpackages Install
updated 12 weeks ago by • 0 • written 3.5 years ago by • 0
1
vote
1
reply
970
views
Errors in installing RforProteomics package
error RforProteomics Install
updated 3.5 years ago by ★ 6.5k • written 3.5 years ago by • 0
1
vote
4
replies
1.6k
views
Failing to install DEP package. Some strange error.
R Bioconductor Install DEP
3.2 years ago tpm • 0
1
vote
20
replies
3.7k
views
Deseq2 installed, but there is no package called ‘Biostrings’
DESeq2 Install
updated 19 months ago by 65k • written 19 months ago by • 0
1
vote
3
replies
5.5k
views
Not able to install packages in Bioconductor version '3.16'
Install BiocManager version3.16
updated 16 months ago by 3.9k • written 18 months ago by • 0
1
vote
1
reply
887
views
Unable to install "scruff" with BiocManager::install()
scruff Install ShortRead
updated 20 months ago by 3.9k • written 20 months ago by • 0
1
vote
4
replies
6.2k
views
Error loading impute(): '/usr/lib/libgfortran.5.dylib' (no such file)
Install impute
updated 12 months ago by • 0 • written 2.3 years ago by • 0
1
vote
1
reply
976
views
simplifyEnrichment install error
package Rversion Install simplifyEnrichment
updated 3.1 years ago by 3.9k • written 3.1 years ago by ▴ 10
1
vote
3
replies
1.1k
views
I can't upgrade to version 3.15 in R
Install
updated 19 months ago by 50k • written 19 months ago by • 0
1
vote
2
replies
836
views
How to install R package from GitHub
Install github
updated 2.2 years ago by 3.9k • written 2.2 years ago by • 0
1
vote
7
replies
1.5k
views
query regarding error in installation of "goseq" R bioconductor package
R Bioconductor Install
updated 17 months ago by 3.9k • written 17 months ago by • 0
1
vote
0
replies
352
views
Tutorial: Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
bioconductor Install
4 weeks ago • updated 29 days ago BioinfGuru ▴ 30
1
vote
2
replies
863
views
Query regarding error in installation of "microbiomeutilities" R package
MicrobiomeData R microbiomeutilities Install
15 months ago abhisek001 • 0
1
vote
1
reply
594
views
Downloading DESeq package manually
DESeq2 Install
updated 19 months ago by ▴ 780 • written 19 months ago by • 0
1
vote
1
reply
2.1k
views
packages not installing from sources the package which needs compilation
Install
updated 17 months ago by 65k • written 17 months ago by • 0
0
votes
4
replies
2.2k
views
Error: unexpected string constant in "suppressPackageStartupMessages(.getRequiredPackages(quietly = TRUE)), when installed the package "Mus.musculus"…
install packages Mus.musculus
updated 3.9 years ago by ★ 3.9k • written 3.9 years ago by • 0
0
votes
0
replies
478
views
Version map cannot be validated - not mapping to new bioconductor website
Install
6 months ago Alexander • 0
0
votes
1
reply
1.0k
views
install GenomicFeatures fail
GenomicFeatures install
updated 2.7 years ago by 65k • written 2.7 years ago by ▴ 80
0
votes
2
replies
991
views
Error when installing pcaExplorer
install GenomeInfoDbData
updated 4.1 years ago by 65k • written 4.1 years ago by • 0
0
votes
5
replies
2.1k
views
Error installing VariantAnnotation with bioconductor/devel_core
install variantannotation
9.2 years ago kforner • 0
0
votes
6
replies
1.7k
views
Illumina Methylation Manifest Install
Install biocinstaller package installation
6.0 years ago julieumn • 0
0
votes
5
replies
2.0k
views
Flowclust install probelms on Ubuntu
flowclust ubuntu install error
9.0 years ago gareth.howell • 0
0
votes
1
reply
1.2k
views
trouble installing DESeq2
install packages R DESeq2
updated 2.0 years ago by 3.9k • written 2.0 years ago by • 0
0
votes
7
replies
1.7k
views
Unable to install RefPlus - R=4.3.1, BiocManager=3.18
Install instal
updated 6 months ago by 65k • written 6 months ago by • 0
0
votes
1
reply
2.1k
views
Compilation problem installing IRanges
Iranges install
updated 9.0 years ago by 16k • written 9.0 years ago by • 0
50 results • Page 1 of 1
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Answer: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k
Your code is poorly readable. Suggest you select and then highlight with markdown using the `10101` button. Generally, colData(dds) must…
Answer: Subsetting RNAseq data | voomaByGroup() by Gordon Smyth 50k
Judging from your MDS plot, cell types 1 and 2 look radically different, so it would make perfect sense to analyse them separately. There's…
Answer: Numerical differences in DESeq2 output depending on different design matrix cons by Michael Love 42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs by Michael Love 42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Ensembl plants at annotationHub? by Daniele • 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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