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News: Bioconductor 3.5 is released
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updated 7.1 years ago by 16k • written 7.1 years ago by ★ 6.8k
3
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9
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2.3k
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Bioconductor docker tags and release versions
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9.0 years ago • updated 8.6 years ago Karl Forner ▴ 70
6
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0
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1.9k
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News: Bioconductor 3.4 is released
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7.6 years ago Hervé Pagès 16k
7
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6
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1.8k
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How to obtain summary statistics for all Bioc releases
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6.0 years ago Robert Ivanek ▴ 730
0
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5
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News: Ensembl 79 release is out!
Ensembl biomart release news News
updated 9.2 years ago by ★ 8.2k • written 9.2 years ago by ▴ 20
4
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11
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News: Bioconductor 3.8 is released
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updated 5.4 years ago by • 0 • written 5.5 years ago by ★ 6.8k
7
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4
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News: Bioconductor 3.7 is released
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written 6.0 years ago by ★ 6.8k
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2
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News: Final List of Deprecated Packages for Bioc3.10
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4.6 years ago • updated 4.5 years ago shepherl 3.9k
0
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4
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1.6k
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Why SPADE package has been removed from bioconductor?
spade release remove clustering
updated 6.0 years ago by 65k • written 6.0 years ago by • 0
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News: Ensembl GRCh37 release 79 data update
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9.1 years ago Thomas Maurel ▴ 800
3
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3
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Using a single R installation with multiple BioConductor library installations - opinions & best practices sought
version release library
updated 9.2 years ago by ▴ 400 • written 9.2 years ago by ★ 1.6k
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News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 5.1 years ago by 3.9k
2
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3
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1.4k
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News: List of Deprecated Packages for Bioc3.8
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5.8 years ago shepherl 3.9k
2
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News: Ensembl 91 is out!
ensembl biomart release ensembl91 News
6.4 years ago amonida ▴ 20
0
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News: Dockers have been updated for Bioc3.6 and Bioc3.7
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6.5 years ago shepherl 3.9k
0
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5
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News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
2.6 years ago • updated 2.1 years ago shepherl 3.9k
1
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3
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News: Initial List of Deprecated Package Bioc 3.9
package deprecate release News
updated 5.5 years ago by ★ 13k • written 5.5 years ago by 3.9k
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1.2k
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News: Ensembl 90 has been released
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6.7 years ago Thomas Maurel ▴ 800
3
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0
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1.2k
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News: Bioconductor 3.5 release
Bioconductor release news News
7.2 years ago Valerie Obenchain ★ 6.8k
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1.2k
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News: List of Deprecated Package Bioc 3.9
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5.2 years ago shepherl 3.9k
0
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4
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News: List of Deprecated Packages for Bioc3.15
Devel Deprecation Release Bioconductor
2.1 years ago • updated 19 months ago shepherl 3.9k
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2
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News: Final List of Deprecated Packages for Bioc3.7
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written 6.1 years ago by 3.9k
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News: Bioconductor 3.9 release schedule
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5.2 years ago shepherl 3.9k
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News: List of Deprecated Package Bioc 3.9
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5.4 years ago shepherl 3.9k
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News: New Package and New Docker Image Submission Deadline for Bioc Release 3.11
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4.2 years ago • updated 4.1 years ago shepherl 3.9k
0
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3
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1.1k
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Bioconductor Release AMI's
Release release AWS AMI Bioconductor
updated 3.0 years ago by 6.7k • written 3.0 years ago by 3.9k
3
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0
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News: Bioconductor 3.3 is released
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8.0 years ago Dan Tenenbaum ★ 8.2k
0
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0
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1.1k
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News: DEADLINE: All packages to pass R CMD build and R CMD check
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6.1 years ago shepherl 3.9k
0
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3
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1.1k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
5.0 years ago shepherl 3.9k
0
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0
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1.1k
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News: Bioconductor 3.1 is released!
release News
9.1 years ago Dan Tenenbaum ★ 8.2k
1
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Rsync Access
release rsync 873
updated 3.1 years ago by 25k • written 3.1 years ago by ▴ 10
0
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1.1k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
4.8 years ago • updated 4.7 years ago shepherl 3.9k
0
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1.0k
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News: Bioconductor 3.13 New Package Submission Deadline
release Submission newpackage Release Deadline
3.1 years ago shepherl 3.9k
5
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0
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1.0k
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News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
3.0 years ago shepherl 3.9k
1
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0
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1.0k
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News: Deadline for devel branch 3.8 to pass R CMD build and R CMD check
deadline release devel freeze News
5.6 years ago shepherl 3.9k
1
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0
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1.0k
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News: New Package Submission Deadline for Bioc Release 3.12
release new package submission deadline News
3.6 years ago shepherl 3.9k
0
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0
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999
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News: Bioconductor Release 3.12 Schedule Posted
packages release deadlines builds News
3.7 years ago shepherl 3.9k
0
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2
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997
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News: Bioconductor 3.6 release: 3.6 branch created
bioconductor release News
6.6 years ago Valerie Obenchain ★ 6.8k
1
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1
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993
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News: DEADLINE: commits to Bioc 3.7
release bioconductor packages package updates News
6.1 years ago shepherl 3.9k
5
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0
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981
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News: Bioconductor 3.6 is released
bioconductor news release News
6.5 years ago Valerie Obenchain ★ 6.8k
0
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979
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News: Deadline for devel branch 3.9 to pass R CMD build and R CMD check
release devel deadline freeze News
5.1 years ago shepherl 3.9k
0
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1
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968
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News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation db0 news release News
3.6 years ago kayla.interdonato ▴ 160
1
vote
3
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961
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PureCN Release Notes
PureCN Release
updated 6.1 years ago by 65k • written 6.1 years ago by ▴ 10
0
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0
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957
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News: List of Deprecated Packages for Bioc3.7
package updates deprecate release News
6.2 years ago shepherl 3.9k
4
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0
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953
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News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
3.6 years ago shepherl 3.9k
0
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0
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950
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News: Final List of Deprecated Packages for Bioc3.6
bioconductor release deprecate News
6.6 years ago shepherl 3.9k
0
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0
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944
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News: Release Deadline: Passing R CMD build and R CMD check
package build build/check error check release News
6.1 years ago shepherl 3.9k
0
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942
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News: Package Submission Deadline is TODAY!!
release package submission new submission deadline News
5.6 years ago shepherl 3.9k
1
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1
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932
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News: Issues with annotation packages
annotation news release News
4.0 years ago kayla.interdonato ▴ 160
0
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0
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928
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News: Bioconductor Release 3.13 Schedule
release Release
3.1 years ago shepherl 3.9k
50 results • Page 1 of 1
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Answer: Numerical differences in DESeq2 output depending on different design matrix cons by Michael Love 42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs by Michael Love 42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Ensembl plants at annotationHub? by Daniele • 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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