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db0
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143
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Join BOC Sciences at Drug Discovery Chemistry
alabaster.schemas
db0
8 weeks ago
bocsci11
• 0
1
vote
0
replies
414
views
News:
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0
release
Annotation
7 months ago
kayla.interdonato
▴ 160
0
votes
0
replies
660
views
News:
Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release
db0
Annotation
13 months ago
kayla.interdonato
▴ 160
0
votes
0
replies
639
views
News:
Bioconductor 3.16 db0s, OrgDbs and TxDbs now available
release
db0
annotation
19 months ago
kayla.interdonato
▴ 160
0
votes
1
reply
814
views
News:
Bioconductor 3.15 db0s, OrgDbs and TxDbs now available
annotation
release
db0
2.1 years ago
kayla.interdonato
▴ 160
1
vote
0
replies
830
views
News:
Bioconductor 3.13 db0s, OrgDbs and TxDbs now available
annotation
release
db0
3.0 years ago
kayla.interdonato
▴ 160
0
votes
1
reply
957
views
News:
Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation
db0
news
release
News
3.6 years ago
kayla.interdonato
▴ 160
0
votes
0
replies
672
views
News:
Bioconductor 3.11 db0s are available
annotation
db0
news
release
News
4.1 years ago
kayla.interdonato
▴ 160
0
votes
0
replies
667
views
News:
Bioconductor 3.10 db0s are available
news
release
annotation
db0
deadline
News
4.6 years ago
kayla.interdonato
▴ 160
0
votes
0
replies
886
views
ka
Annotation
db0
Annotation
db0
10.6 years ago
Guest User
★ 13k
0
votes
2
replies
2.0k
views
problem with makeOrgPackageFromNCBI (for Chinese hamster)
Annotation
GO
db0
PROcess
Annotation
GO
db0
PROcess
updated 10.7 years ago by
Marc Carlson
★ 7.2k • written 10.7 years ago by
Guido Hooiveld
★ 3.9k
0
votes
1
reply
1.0k
views
Add new affy organism platform
Microarray
Annotation
Organism
cdf
db0
probe
annotate
affy
Microarray
Annotation
cdf
updated 11.0 years ago by
Marc Carlson
★ 7.2k • written 11.0 years ago by
Ekta Jain
▴ 50
0
votes
0
replies
1.4k
views
450K annotation: discrepancy between GEO GPL and Bioconductor annotation
Annotation
db0
probe
annotate
PROcess
GenomicFeatures
GenomicRanges
Annotation
db0
probe
11.6 years ago
Marc Carlson
★ 7.2k
0
votes
1
reply
1.1k
views
building an annotation library from scratch
miRNA
Annotation
Organism
db0
AnnotationDbi
microRNA
miRNA
Annotation
Organism
db0
updated 14.5 years ago by
Marc Carlson
★ 7.2k • written 14.5 years ago by
James F. Reid
▴ 610
0
votes
0
replies
1.1k
views
building an annotation library from scratch
miRNA
Annotation
db0
AnnotationDbi
miRNA
Annotation
db0
AnnotationDbi
14.5 years ago
Guido Hooiveld
★ 3.9k
0
votes
2
replies
1.7k
views
GO terms for E. coli micro arrays (ecoliK12.db generation)
Annotation
GO
Yeast
db0
probe
topGO
AnnotationDbi
Annotation
GO
Yeast
db0
probe
topGO
updated 14.9 years ago by
Marc Carlson
★ 7.2k • written 14.9 years ago by
Gaspard Lequeux
▴ 20
0
votes
0
replies
924
views
hyperGTest, different Results using different annotation packages
Microarray
Annotation
GO
ChipName
db0
GOstats
Category
Microarray
Annotation
GO
ChipName
15.1 years ago
Wiebke Iffert
▴ 20
0
votes
1
reply
1.1k
views
memory corruption in make.cdf.package() reading binary CDF with BioC 2.3
cdf
db0
cdf
db0
updated 15.5 years ago by
Wolfgang Huber
★ 13k • written 15.5 years ago by
Don Maszle
▴ 10
0
votes
1
reply
1.8k
views
problem with AnnotationDbi
ChipName
db0
affy
Category
AnnotationDbi
ChipName
db0
affy
Category
AnnotationDbi
updated 15.5 years ago by
Hervé Pagès
16k • written 15.5 years ago by
Mark W Kimpel
▴ 830
0
votes
2
replies
1.4k
views
GO over representation analysis
Annotation
Pathways
GO
Organism
db0
AnnBuilder
PROcess
maanova
AnnotationDbi
Annotation
updated 15.7 years ago by
Kort, Eric
▴ 220 • written 15.7 years ago by
Marc Carlson
★ 7.2k
20 results • Page
1 of 1
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Replies
Answer: normalization using Deseq2
by
ATpoint
★ 4.1k
counts(dds, normalized=TRUE)
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Hi Michael, I have tried what you suggested. I started with methylation loci. I created segment1 and segment2 but how to combine them bec…
Comment: EGSEA usage with microarray data (with vooma)?
by
Chris
• 0
Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
> Any suggestions for methylation data segmentation? I think the same segmentation can be used.
Comment: deseq2 results
by
swbarnes2
★ 1.3k
Cross-posted https://www.biostars.org/p/9594331/#9594458
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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42k
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