Bioconductor SingleCellExperiment

Showing : SingleCellExperiment • reset

votes

349

views

BatchEffect SingleCellExperiment

updated 3 months ago by James W. MacDonald 65k • written 3 months ago by NeuroDaniel • 0

votes

replies

599

views

SingleCellExperiment

4 months ago Dario Strbenac ★ 1.5k

votes

replies

175

views

SingleCellExperiment

4 months ago JalapenoCornbread • 0

vote

replies

959

views

SingleR SingleCellExperiment

5 months ago elgomez • 0

votes

replies

522

views

tidyverse R SingleCellExperiment SingleCellData

updated 5 months ago by daenerystargaryen56 • 0 • written 5 months ago by Sitapriya • 0

votes

521

views

SingleCellExperiment

written 7 months ago by megan • 0

vote

replies

884

views

scRNAseq edgeR SingleCellExperiment

9 months ago duez.tolga • 0

votes

replies

946

views

singleR SingleCellExperiment SingleCellData

10 months ago Matvii Mykhailichenko • 0

votes

replies

859

views

scran SingleCellExperiment

11 months ago Lluís Revilla Sancho ▴ 730

vote

replies

1.8k

views

SingleCellExperiment

written 5.1 years ago by Matthew Thornton ▴ 360

10 results • Page 1 of 1

Recent ...

Replies

Comment: all variables in design formula must be columns in colData (Deseq2) error by Galina • 0

thank you!

Comment: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k

coldata_rat <- data.frame(conditions=..., batch=...)

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by robersy • 0

Thank you all for your comments. I will follow your suggestions.

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…

Votes

biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Awards • All