Bioconductor TimeSeriesExperiment

Showing : TimeSeriesExperiment • reset

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Proteomics limma repeatedmeasures TimeSeriesExperiment

18 months ago proteome_AO • 0

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2.0k

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R GillespieColin ArrayExpress import TimeSeriesExperiment

updated 7 months ago by jacorvar ▴ 40 • written 19 months ago by eraldagjika ▴ 20

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634

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DESeq2 TimeSeriesExperiment

updated 19 months ago by Michael Love 42k • written 20 months ago by Jason • 0

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782

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DESeq2 single-timeseries TimeSeriesExperiment

updated 20 months ago by Michael Love 42k • written 20 months ago by Jigyasa • 0

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651

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DESeq2 MultipleFactors TimeSeriesExperiment

updated 20 months ago by Michael Love 42k • written 20 months ago by Maria • 0

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805

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TimeSeriesExperiment RNASeq design DESeq2

updated 2.5 years ago by Michael Love 42k • written 2.5 years ago by Kesava • 0

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817

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TimeSeriesExperiment Regression top limma

updated 2.7 years ago by James W. MacDonald 65k • written 2.7 years ago by Eleni • 0

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1.7k

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LRT Design DESeq2 doseResponse TimeSeriesExperiment

updated 2.7 years ago by Michael Love 42k • written 2.7 years ago by Mari • 0

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796

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TimeSeriesExperiment

updated 3.0 years ago by Michael Love 42k • written 3.0 years ago by curiousmind007 ▴ 10

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973

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QTL fourier TimeSeriesExperiment timecoursedata

3.1 years ago Daphne • 0

10 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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