Bioconductor Timecoursedata

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212

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DESeq2 timecoursedata GeneExpression

updated 15 hours ago by ATpoint ★ 4.1k • written 1 day ago by pangtaihin • 0

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164

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DESeq2 ImpulseDE2 timecour timecoursedata moanin

16 days ago • updated 13 days ago Aurora • 0

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1.4k

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timecoursedata limma

8 months ago • updated 5 months ago triZZla • 0

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962

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time-series DESeq2 RNASeq timecoursedata TimeCourse

updated 9 months ago by ATpoint ★ 4.1k • written 9 months ago by Debebe • 0

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526

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timecoursedata RNASeqData TimeCourse DESeq2

updated 10 months ago by Michael Love 42k • written 10 months ago by georgii.vdovin • 0

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486

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timecoursedata edgeR

updated 14 months ago by Gordon Smyth 50k • written 14 months ago by boczniak767 ▴ 720

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651

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DESeq2 timecoursedata replicates

updated 14 months ago by Michael Love 42k • written 14 months ago by fepesanz8 • 0

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622

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DESeq2 time-series timecoursedata timecourse multifactorial

updated 17 months ago by Michael Love 42k • written 18 months ago by arshad1292 • 0

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971

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QTL fourier TimeSeriesExperiment timecoursedata

3.1 years ago Daphne • 0

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1.4k

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limma proteomics TMTlabeling timecoursedata

updated 3.5 years ago by SamGG ▴ 350 • written 3.5 years ago by maleknias • 0

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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