Bioconductor XVector

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bioconductor iranges s4vectors xvector r 3.3.2

updated 5.8 years ago by becker.gabriel ▴ 10 • written 5.8 years ago by chokoiboko • 0

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XVector docker Install

2.5 years ago RobKo ▴ 10

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IRanges GenomicRanges VariantTools XVector IRanges GenomicRanges VariantTools XVector

updated 10.5 years ago by Michael Lawrence ★ 11k • written 10.5 years ago by heyi xiao ▴ 360

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software error gcrma Xvector iranges

7.8 years ago • updated 7.7 years ago gary_smith • 0

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variantannotation xvector iranges

6.0 years ago Vivek.b ▴ 100

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XVector XVector

updated 10.8 years ago by Hervé Pagès 16k • written 10.8 years ago by Pengcheng Yang ▴ 60

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subseq Xvector dnastringset

updated 7.0 years ago by Hervé Pagès 16k • written 7.0 years ago by Sophie • 0

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S4Vectors IRanges XVector GenomicRanges scran

updated 5.4 years ago by Aaron Lun ★ 28k • written 5.4 years ago by Momo • 0

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Network Cancer IRanges XVector

9.7 years ago Hervé Pagès 16k

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1.3k

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Cancer XVector

9.7 years ago Hervé Pagès 16k

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704

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XVector

updated 3.2 years ago by Martin Morgan 25k • written 3.2 years ago by robmaz77 ▴ 20

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xvector

7.1 years ago Charles Plessy ▴ 180

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696

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IRanges XVector AtomicList

written 23 months ago by Pierre-Luc Germain ▴ 20

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Answer: How to run allelic imbalance in apeglm by Michael Love 42k

You can put 1 / 1 for the ratio when you are missing counts and then set the weight for that matrix cell to 1e-6. Let me know if that's …

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Got you. Thanks again for your comments.

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

Thanks so much for your comment. Yes, this makes sense to me, especially since the effect of the drug is subtle. But it raises a larger con…

Answer: ERROR; return code from pthread_create() is 22 by James W. MacDonald 65k

Seems OK to me. ``` > dat <- ReadAffy() > dat AffyBatch object size of arrays=744x744 features (20 kb) cdf=HG-U219 (49386 affyids) …

Answer: LRT, more than two conditions and pairwise comparisons by James W. MacDonald 65k

Unless you think the different lines or tissues will have very different within-group variances, you should just analyze together and make …

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Answer: DESeq2- Mysterious interaction suppresses DEGs

Answer: Subsetting RNAseq data | voomaByGroup()

biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

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