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bioconductor
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2
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5
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205
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Error while installing BiocManager::install("org.Vdahliae.eg.db")
org.vdahlaie.eg.db
Bioconductor
2 days ago • updated 1 day ago
Patadù
▴ 10
1
vote
0
replies
322
views
News:
Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition
Awards
Bioconductor
Bioc204
8 weeks ago • updated 3 days ago
shepherl
3.9k
0
votes
1
reply
106
views
Recovering my account credentials on Bioconductor
Bioconductor
updated 10 days ago by
shepherl
3.9k • written 11 days ago by
cyril.dalmasso
• 0
4
votes
0
replies
135
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
16 days ago
shepherl
3.9k
0
votes
0
replies
93
views
News:
BioC2024 deadlines approaching
BioC2024
Bioconductor
Community
17 days ago
Maria Doyle
▴ 70
1
vote
0
replies
349
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
bioconductor
Install
28 days ago
BioinfGuru
▴ 30
3
votes
18
replies
3.0k
views
News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
10 months ago • updated 4 weeks ago
shepherl
3.9k
0
votes
0
replies
101
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
5 weeks ago
shepherl
3.9k
0
votes
7
replies
435
views
Internet connection for Bioconductor packages in Rstudio in Iran...
No_internet_connection_Packages
Proxy
Bioconductor
GEOquery
Internet_connection_problem
6 weeks ago
needNGS
• 0
0
votes
2
replies
189
views
bioconductor emailing list
Bioconductor
updated 7 weeks ago by
shepherl
3.9k • written 7 weeks ago by
1427972815
• 0
0
votes
0
replies
163
views
News:
Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st!
BioC2024
Conference
Bioconductor
8 weeks ago
Maria Doyle
▴ 70
1
vote
2
replies
278
views
supportedOrganisms() in goseq producing Error in names(trackIds)
goseq
Bioconductor
rtracklayer
10 weeks ago
thomas
• 0
1
vote
0
replies
291
views
News:
Nominations for Bioconductor Awards 2024!
Recognition
Awards
Bioconductor
Bioc2024
12 weeks ago • updated 10 weeks ago
shepherl
3.9k
0
votes
1
reply
329
views
News:
BioC2024 abstract submission is open!
BioC2024
Conference
Bioconductor
updated 8 weeks ago by
howell
• 0 • written 12 weeks ago by
Maria Doyle
▴ 70
0
votes
0
replies
196
views
News:
BioC2024 registration is now open!
BioC2024
Conference
Bioconductor
Community
11 weeks ago
Maria Doyle
▴ 70
6
votes
11
replies
1.1k
views
Packages don't update, but no error or warning is thrown
Bioconductor
3 months ago
gernophil
• 0
0
votes
0
replies
192
views
News:
EuroBioC2024 abstract submission is open!
Conference
Bioconductor
EuroBioC2024
3 months ago
Maria Doyle
▴ 70
2
votes
0
replies
255
views
News:
Upholding our core values: a reminder of the Bioconductor Code of Conduct
Bioconductor
3 months ago
Maria Doyle
▴ 70
0
votes
1
reply
263
views
Bioconductor: Won't Update to 3.18 with Default Command
Bioconductor
updated 3 months ago by
Lluís Revilla Sancho
▴ 730 • written 3 months ago by
vanbelj
▴ 30
1
vote
5
replies
515
views
Can't post a question containing code?
Bioconductor
updated 7 days ago by
NATASHA
• 0 • written 3 months ago by
DS
▴ 10
0
votes
1
reply
216
views
Limitation on single file size and package size when developing Bioc package
packagedevelopment
datalimit
Bioconductor
updated 3 months ago by
Hervé Pagès
16k • written 3 months ago by
Xin Wang
• 0
0
votes
0
replies
273
views
News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
3 months ago
shepherl
3.9k
2
votes
1
reply
295
views
News:
"Edit" button not working
Bioconductor
Website
SupportSite
updated 3 months ago by
Lori
• 0 • written 4 months ago by
shepherl
3.9k
2
votes
2
replies
331
views
How to contact Bioconductor's test host?
Bioconductor
updated 4 months ago by
Hervé Pagès
16k • written 4 months ago by
Marek Gierlinski
▴ 30
0
votes
4
replies
802
views
Bioconductor installation
Bioconductor
written 4 months ago by
Akhil
• 0
4
votes
3
replies
355
views
Bioconductor code browser time out
Bioconductor
updated 4 months ago by
Mike Smith
★ 6.5k • written 4 months ago by
Marek Gierlinski
▴ 30
3
votes
1
reply
338
views
News:
Bioconductor.org has a new look!
Bioconductor
Website
written 4 months ago by
shepherl
3.9k
0
votes
0
replies
290
views
News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
4 months ago
info
▴ 10
0
votes
3
replies
1.7k
views
Error in library(oligo) : package or namespace load failed for ‘oligoClasses’
R
oligoClasses
Oligoclass
Bioconductor
Oligo
written 3.2 years ago by
tanya
• 0
1
vote
5
replies
2.2k
views
pd.mogene.2.0st Error Installing in R 3.1.2
oligo
microarray
r
bioconductor
written 9.3 years ago by
chandlerjd58
▴ 10
5
votes
1
reply
464
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 6 months ago by
shepherl
3.9k
0
votes
0
replies
258
views
Normalising processed Proteomics data in R
Bioconductor
Proteomics
5 months ago
Joshua
• 0
0
votes
6
replies
2.2k
views
Error when Installing BioConductor Package ('affy')
Bioconductor
Install
affy
updated 6 months ago by
ATpoint
★ 4.1k • written 17 months ago by
laujihen
• 0
2
votes
0
replies
499
views
News:
Bioconductor's Transition Away from Twitter/X
Bioconductor
6 months ago
Maria Doyle
▴ 70
0
votes
0
replies
310
views
News:
CRAN downtime
BiocManager
Bioconductor
6 months ago
shepherl
3.9k
2
votes
4
replies
660
views
Import a Bioconductor package that is only used in a vignette/.Rmd script
Bioconductor
PackageType
BiocStyle
updated 6 months ago by
shepherl
3.9k • written 6 months ago by
lavanilla44
• 0
0
votes
2
replies
818
views
Job:
Bioinformatics Laboratory Head in AI or machine learning (WEHI, Australia)
bioconductor
artificialintelligence
JobPosting
machinelearning
written 8 months ago by
Gordon Smyth
50k
0
votes
3
replies
581
views
Support for installation and usage of TxDb.Hsapiens.UCSC.hg19.knownGene package in R version 4.2.2
Bioconductor
BiocPkgTools
6 months ago
blessybo
• 0
0
votes
1
reply
357
views
Advice needed on package using online databases (fails CHECK when database is down)
Bioconductor
updated 6 months ago by
shepherl
3.9k • written 6 months ago by
Marek Gierlinski
▴ 30
4
votes
10
replies
1.8k
views
Archives prior to 3.15 gone
archive
bioconductor
updated 6 months ago by
shepherl
3.9k • written 20 months ago by
Florian Finkernagel
▴ 30
0
votes
0
replies
380
views
News:
COURSE - Developing R/Bioconductor Packages for Genomics
Bioconductor
PackageTypeData
PackageType
7 months ago
info
▴ 10
2
votes
1
reply
874
views
limma::topTable with adjust.method=NULL is not BH corrected (manual is inconsistent with behavior?)
Bioconductor
biocon
limma
updated 7 months ago by
Gordon Smyth
50k • written 7 months ago by
ningyuan
• 0
2
votes
11
replies
967
views
Error MakeOrgPackagefromNCBI
Bioconductor
updated 3 months ago by
Guido Hooiveld
★ 4.0k • written 7 months ago by
cinzia.spagnoli
• 0
5
votes
2
replies
791
views
ComBat_seq function in sva package does not return a matrix
sva
ComBat
ComBat-seq
Bioconductor
ComBat_seq
7 months ago
Federico
▴ 10
0
votes
2
replies
679
views
For R version 4.0.2 and Biconductor version 3.11, clusterProfiler is not working
Bioconductor
clusterProfiler
updated 7 months ago by
James W. MacDonald
65k • written 7 months ago by
nilanjanamani88
• 0
0
votes
2
replies
1.1k
views
Bioconductor version cannot be validated
Bioconductor
updated 6 months ago by
Manuel
• 0 • written 8 months ago by
xlu.cpu
• 0
0
votes
1
reply
3.7k
views
Bioconductor version cannot be validated
Bioconductor
Annotation
Ann
updated 8 months ago by
James W. MacDonald
65k • written 8 months ago by
Aytaç
• 0
0
votes
2
replies
975
views
MACS2 not installing
Bioconductor
8 months ago
alia.sinqua
• 0
0
votes
0
replies
651
views
NAs in tabular output from DNAcopy
Bioconductor
DNAcopy
8 months ago
NewtoBioconductor
• 0
1
vote
4
replies
790
views
running Bioconductor Docker images only works with versions <= 3.15
Bioconductor
9 months ago
patrick.turko
• 0
50 results • Page
1 of 1
Recent ...
Replies
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
JKim
• 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Awards
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Vincent J. Carey, Jr.
6.7k
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Koen Van den Berge
▴ 180
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shepherl
3.9k
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