Bioconductor Combat sva

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SVA combat sva leek

updated 3.0 years ago by chase.mateusiak • 0 • written 7.1 years ago by amoltej ▴ 10

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941

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combat combat sva pamr limma design matrix sva

5.7 years ago jmsendoya • 0

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827

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combat sva batch effect

5.9 years ago Fp • 0

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635

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combat sva

6.1 years ago jonellevillar • 0

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1.2k

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combat combat sva

6.6 years ago Miss Agnieszka Aleksandra Golicz ▴ 40

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1.2k

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combat sva microarry Jeff leek

6.9 years ago DataFanatic ▴ 10

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892

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combat sva sva

7.0 years ago alice.anlind • 0

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1.2k

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combat sva input files

7.2 years ago arisarkar88 ▴ 40

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1.2k

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batch effect combat sva sva

7.2 years ago Ahdee ▴ 50

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957

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combat sva

7.5 years ago vinnu260 ▴ 10

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1.6k

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combat sva batch effect comba

updated 7.5 years ago by Vegard Nygaard ▴ 110 • written 7.5 years ago by amoltej ▴ 10

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2.3k

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svaseq combat sva RANseq batcheffect removebatcheffect

updated 7.6 years ago by Jakub ▴ 50 • written 7.6 years ago by amoltej ▴ 10

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933

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combat sva

7.7 years ago kkwon • 0

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1.7k

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affymetrix microarrays sva combat sva batch effect plotMDS

updated 7.7 years ago by Jeff Leek ▴ 650 • written 7.7 years ago by svlachavas ▴ 830

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SVA combat sva batch effect

updated 7.8 years ago by Jeff Leek ▴ 650 • written 7.8 years ago by amoltej ▴ 10

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1.9k

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ENmix combat.mc illumina450k combat sva

7.9 years ago DSP • 0

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1.1k

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combat sva sga combat batch effect

8.1 years ago John Townsend ▴ 20

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3.1k

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combat sva SVA sva ComBat batch effect

updated 8.1 years ago by W. Evan Johnson ▴ 850 • written 8.1 years ago by John Townsend ▴ 20

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2.5k

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R Combat SVA

updated 8.3 years ago by Steve Lianoglou ★ 13k • written 8.3 years ago by nazaninhoseinkhan • 0

19 results • Page 1 of 1

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Comment: all variables in design formula must be columns in colData (Deseq2) error by Galina • 0

thank you!

Comment: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k

coldata_rat <- data.frame(conditions=..., batch=...)

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by robersy • 0

Thank you all for your comments. I will follow your suggestions.

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…

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biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

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