Bioconductor Svaseq

Showing : svaseq • reset

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663

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RUVSeq svaseq

22 months ago Tongjun • 0

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1.1k

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RNASeq sva svaseq

updated 2.3 years ago by James W. MacDonald 66k • written 2.3 years ago by Bex • 0

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796

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limma sva Leafcutter SVAseq

2.6 years ago georgia.katsoula ▴ 40

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778

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sva svaseq surrogate variable analysis

updated 4.1 years ago by James W. MacDonald 66k • written 4.1 years ago by Mozart ▴ 30

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932

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svaseq sva

5.2 years ago flippy23 • 0

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887

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MEDIPS svaseq sva

updated 5.3 years ago by Lukas Chavez ▴ 570 • written 5.3 years ago by tofukaj • 0

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1.6k

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deseq2 svaseq

5.3 years ago bioinfo • 0

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1.5k

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edger sva svaseq limma

updated 6.0 years ago by Ryan C. Thompson ★ 7.9k • written 6.0 years ago by cats_dogs ▴ 20

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3.2k

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DESeq2 sva svaseq batch effect correction

6.3 years ago L_K • 0

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1.1k

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svaseq batcheffectcorrection

6.5 years ago burcu.atasu • 0

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1.5k

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ruvseq svaseq edaseq

updated 6.5 years ago by davide risso ▴ 950 • written 6.5 years ago by llo ▴ 10

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1.2k

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sva svaseq batch effect batch effects batch effect correction

6.8 years ago vedran.franke • 0

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1.7k

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deseq2 svaseq

updated 6.8 years ago by Michael Love 42k • written 6.8 years ago by gpalidwor ▴ 10

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1.7k

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sva svaseq

updated 6.9 years ago by Guido Hooiveld ★ 4.0k • written 6.9 years ago by wamiqsaifi • 0

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2.5k

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limma sva svaseq

updated 7.2 years ago by Aaron Lun ★ 28k • written 7.2 years ago by Bogdan ▴ 670

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1.8k

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svaseq dexseq

updated 7.3 years ago by Alejandro Reyes ★ 1.9k • written 7.3 years ago by tofukaj • 0

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2.3k

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svaseq combat sva RANseq batcheffect removebatcheffect

updated 7.6 years ago by Jakub ▴ 50 • written 7.6 years ago by amoltej ▴ 10

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5.3k

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deseq2 svaseq

7.6 years ago Akula, Nirmala NIH/NIMH [C] ▴ 190

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1.7k

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deseq2 sva svaseq

updated 7.7 years ago by Michael Love 42k • written 7.7 years ago by szenitha ▴ 20

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2.5k

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sva svaseq batcheffectcorrection

updated 7.8 years ago by Jeff Leek ▴ 650 • written 7.8 years ago by szenitha ▴ 20

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3.7k

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deseq2 sva svaseq pca

7.9 years ago Peter Alto ▴ 10

21 results • Page 1 of 1

Recent ...

Replies

Comment: Ensembl plants at annotationHub? by Daniele • 0

Thank you so much!

Answer: recount3 problem downloading data from source sra by Leonardo Collado Torres ★ 1.0k

Hi, I wasn't able to reproduce the issue on both bioc 3.19 (current release version) and 3.18 (closer to your session info). My guess is…

Answer: Running ENmix with mouse methylation manifest: readidat error - Error in readman by minardsmitha ▴ 10

Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …

Answer: Documenting resources in an `ExperimentHub` package? by James W. MacDonald 66k

The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…

Comment: ChAMP installation issue by shepherl 3.9k

We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…

Votes

Comment: Ensembl plants at annotationHub?

how to control age and gender effect in expression data using DESeq2

Answer: Error retrieving ensembl gene id using biomaRt...

Comment: LRT, more than two conditions and pairwise comparisons

Answer: Control group between 2 batches have different expression in RNAseq data

Awards • All

Scholar to Mike Smith ★ 6.5k

Popular Question to mohammedtoufiq91 ▴ 10