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data.frame
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2
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629
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'Killed' error during RNAseq alignment
subjunc
data.frame
myExons
Rsubread
updated 11 months ago by
ATpoint
★ 4.2k • written 11 months ago by
Sukeerthi
• 0
0
votes
1
reply
635
views
?? Any R script for subtracting multiple controls from multiple patients in data.frame and assign 1 if output is less than 0
Rscript
data.frame
forloop
R
3.8 years ago
Ankit
▴ 20
1
vote
1
reply
1.3k
views
TCGA isoform expression quantification file - how to reshape data
data.frame
tcga
reshape data
updated 5.0 years ago by
Steve Lianoglou
★ 13k • written 5.0 years ago by
mario.zanfardino
▴ 160
0
votes
1
reply
747
views
Error in data.frame for limmaCtData function
software error
limma
data.frame
updated 5.7 years ago by
Gordon Smyth
50k • written 5.7 years ago by
azmir004
• 0
0
votes
1
reply
999
views
Workflow Perraudeau F1000 - Bioconductor workflow for scRNA-seq
data.frame
read.table
updated 6.2 years ago by
davide risso
▴ 950 • written 6.2 years ago by
viviana.marin-esteban
• 0
0
votes
0
replies
1.0k
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
6.3 years ago
aokoro
• 0
3
votes
2
replies
1.6k
views
AnnotationHub: A RPKM data.frame of Epigenomics RoadMap Project seems strange
annotationhub
roadmap project
rpkm
data.frame
7.6 years ago
wcstcyx
▴ 30
0
votes
1
reply
1.2k
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
8.1 years ago
waqasnayab
• 0
6
votes
3
replies
3.4k
views
How to transform cytometry data from CSV and not FCS file?
flowcore
transform
data.frame
updated 8.1 years ago by
Jiang, Mike
★ 1.3k • written 8.1 years ago by
Julia
▴ 20
3
votes
3
replies
1.5k
views
Sorting data frame derived from GRanges
granges
data.frame
sort
updated 8.6 years ago by
Michael Lawrence
★ 11k • written 8.6 years ago by
igor
▴ 50
2
votes
2
replies
885
views
Error when add `in` column into data.frame
data.frame
updated 8.7 years ago by
Ryan C. Thompson
★ 7.9k • written 8.7 years ago by
qiuworld.ou
• 0
2
votes
6
replies
1.7k
views
edgeR output error and data frame setting
EdgeR
data.frame
glmLRT
updated 8.8 years ago by
Gordon Smyth
50k • written 8.8 years ago by
amoltej
▴ 10
12 results • Page
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Comment: Volcano plot of scRNA-seq data not "centered"
by
tjl
• 0
Thank you both. The code is below, simplified a bit for simplicity. ATpoint, your suggestion re: the top 20% of genes by baseMean makes me …
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
Wait a minute. The `oligo` package is *supposed to* be using `zlibbioc`, but apparently it is not. I get the same thing as you do, where it…
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
There is the `zlibbioc` package that provides the headers for zlib 1.2.5, that I think you should be able to use, although that would requi…
Answer: GSVA function
by
Robert Castelo
★ 3.3k
Hi, We recommend to input normalized expression values in logarithmic scale to GSVA. We also recommend to use the latest release of the …
Comment: Cannot install oligo on Fedora
by
Guido Hooiveld
★ 4.0k
Aha, that is a good one! Starting from release 40, as I just found out, Fedora apparently is not including/using `zlib` as such anymore, b…
Votes
Answer: How to run allelic imbalance in apeglm
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Answer: Documenting resources in an `ExperimentHub` package?
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Seurat/DESeq2 - single cell RNA-seq differential expression
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