Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
emptyDrops
•
reset
0
votes
2
replies
269
views
Non-empty droplets versus good quality cells
CellRanger
emptyDrops
scRNAseq
10X
10 weeks ago
rocanja
▴ 60
0
votes
1
reply
702
views
Choosing the right lower limit for emptyDrops
SingleCell
emptyDrops
10X
updated 12 months ago by
Peter Hickey
▴ 740 • written 13 months ago by
sandra.garces.19
• 0
4
votes
5
replies
2.4k
views
`emptyDrops()` calling 'too many' non-empty droplets
DropletUtils
emptyDrops
scRNA
scRNAseq
10x
22 months ago • updated 21 months ago
Peter Hickey
▴ 740
1
vote
1
reply
1.1k
views
Number of non-empty drops returned by emptyDrops() depends on value of test.ambience
DropletUtils
emptyDrops
10x
updated 3.3 years ago by
Aaron Lun
★ 28k • written 3.4 years ago by
Peter Hickey
▴ 740
4
votes
5
replies
2.0k
views
emptyDrops identified less non-empty cells with lower total UMI counts?
DropletUtils
scRNA-seq
emptyDrops
simplesinglecell
cell calling
updated 3.6 years ago by
Aaron Lun
★ 28k • written 4.8 years ago by
C T
▴ 140
5
votes
1
reply
4.5k
views
Error with DropletUtils::EmptyDrops()
DropletUtils
EmptyDrops
simpleSingleCell
updated 21 months ago by
Stefano Mangiola
▴ 10 • written 4.8 years ago by
shbrief
▴ 20
0
votes
2
replies
1.1k
views
Scalability of emptyDrops() running times
dropletutils
emptydrops
updated 5.0 years ago by
Aaron Lun
★ 28k • written 5.0 years ago by
rosano
• 0
7 results • Page
1 of 1
Recent ...
Replies
Comment: How to run allelic imbalance in apeglm
by
parayod376
• 0
Which I care about. [Papa's games][1] thank you for sharing the information. [1]: https://papasgamesfree.github.io
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
FYI, I emailed Benilton and he says he's working on a fix, so stay tuned!
Answer: Error in render R qmd document (could not find function "process")
by
James W. MacDonald
66k
If you have functions in another R document, you have to `source` that document to load the functions into your workspace. Just like you wo…
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
atan
• 0
Thank you! I ended up running it with a gtf on command line, partially because I couldn't figure out how to list multiple files in R for in…
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
atan
• 0
For some reason, that's still not working for me on command line. I ended up figuring out another way around, though, by converting the g…
Votes
Reduce the number of nodes appear in the cnetplot of clusterprofiler
A: DESeq2: add annotations (from data frame) to DESeqDataSet
Answer: Error in gseDO function
Comment: what the test method for enrichGO in clusterProfiler?
A: Comparison between two different group's pathway analysis results
Awards
• All
Popular Question
to
shepherl
3.9k
Popular Question
to
Guido Hooiveld
★ 4.0k
Popular Question
to
Chris
▴ 10
Popular Question
to
Dario Strbenac
★ 1.5k
Popular Question
to
Robert Castelo
★ 3.3k
Locations
• All
Canada,
9 minutes ago
Slovakia,
34 minutes ago
Australia,
1 hour ago
WEHI, Melbourne, Australia,
2 hours ago
United States,
2 hours ago
Traffic: 421 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6