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Showing :
gene symbol
•
reset
0
votes
4
replies
2.6k
views
DESeq2 swap ensembl gene id rownames with gene symbol column
deseq2
dataframe
ensembl gene id
gene symbol
entrezid
4.4 years ago
jason.williams
• 0
0
votes
3
replies
2.0k
views
DESeq2: removal of duplicated genes during statistical analysis
deseq2
gene symbol
ensembl
updated 5.5 years ago by
Michael Love
42k • written 5.5 years ago by
thkapell
▴ 10
1
vote
2
replies
946
views
Obtain GRanges object by gene names
GRanges
gene symbol
IdeoViz
5.5 years ago
Arman Shahrisa
▴ 20
0
votes
3
replies
1.6k
views
DMRcate package :How to find the gene associated with coordinate
dmrcate
gene symbol
coordinate
5.9 years ago
574233829
• 0
0
votes
3
replies
1.5k
views
Choosing most accurate gene symbol from multiple gene symbols
transcript_id
gene symbol
updated 8.7 years ago by
James W. MacDonald
65k • written 8.7 years ago by
Jo
▴ 30
2
votes
4
replies
13k
views
biomartRt: convert mouse gene symbol return multiple human gene symbol
biomart
gene symbol
updated 8.8 years ago by
Diego Diez
▴ 760 • written 9.0 years ago by
chang02_23
▴ 30
0
votes
2
replies
3.5k
views
Mapping gene IDs to gene symbol of KEGG pathways with "Pathview"
Pathview
KEGG
annotation
gene symbol
visualization
updated 8.9 years ago by
Luo Weijun
★ 1.6k • written 8.9 years ago by
alakatos
▴ 130
3
votes
3
replies
3.0k
views
Different answer from Homo.sapiens and biomaRt packages!!
biomart
homo.sapiens
genome regions
gene symbol
updated 9.0 years ago by
Hervé Pagès
16k • written 9.0 years ago by
NS
▴ 60
27
votes
21
replies
23k
views
Mapping genome regions to gene symbols
tcga cnv
gene symbol
coordinate
updated 18 months ago by
James W. MacDonald
65k • written 9.1 years ago by
NS
▴ 60
0
votes
3
replies
2.7k
views
filtering out probes with no gene symbol from expressionSet
probe
filter
subset
gene symbol
affy
9.2 years ago
alakatos
▴ 130
10 results • Page
1 of 1
Recent ...
Replies
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
Hi @marcelramos Thanks for the clarification. Yes, I have installed `org.Vdahlaie.eg.db` using the code you and Guido suggested and now i…
Comment: European Bioconductor Conference 2023 planning
by
angelaesper43
• 0
@Maria Doyle[sexdolltech][1]Hosting EuroBioC provides an excellent opportunity to showcase Bioconductor and computational biology research …
Comment: Ensembl plants at annotationHub?
by
Johannes Rainer
★ 2.0k
Dear Daniele, for which Ensembl release would you need the data? the most recent is 112, but if you used a different version before it wou…
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
by
BioinfGuru
▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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Ken C
• 0
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Johannes Rainer
★ 2.0k
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Chris
▴ 10
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Guido Hooiveld
★ 4.0k
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