Bioconductor Karyoploter

Showing : karyoploter • reset

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BSgenome.Athaliana.TAIR.TAIR10. karyoploteR BSgenome

updated 19 months ago by James W. MacDonald 65k • written 19 months ago by rtt100 • 0

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1.2k

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karyoploter

updated 6.7 years ago by bgel ▴ 10 • written 6.7 years ago by spr ▴ 10

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1.9k

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software error R bsgenome karyoploter

updated 6.5 years ago by bernatgel ▴ 150 • written 6.5 years ago by kirannbishwa01 ▴ 10

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864

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karyoploteR

updated 5.1 years ago by bernatgel ▴ 150 • written 5.1 years ago by saeed Ur Rehman • 0

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2.9k

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karyoploter

updated 4.7 years ago by bernatgel ▴ 150 • written 4.7 years ago by Aditya ▴ 160

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473

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GenomicFeatures karyoploteR TxDb.Hsapiens.UCSC.hg19.knownGene

13 months ago • updated 12 months ago Shreyash ▴ 10

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830

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KaryoploteR

updated 3.7 years ago by Kevin Blighe ★ 3.9k • written 3.7 years ago by mpigozzi • 0

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881

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KaryoploteR

6.8 years ago Radek ▴ 90

8 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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