Showing : tilingarray • reset
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Mapping Affymetrix Arabidopsis Tiling Array 1.0R in Integrated Genome Browser
bioconductor affy tilingarray
7.5 years ago jmtepp • 0
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Ringo Plots Only Partially Made
Ringo affy tilingarray plot starr
8.9 years ago bruce.moran ▴ 30
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undocumented behavior in tilingArray::costMatrix [Scanned]
tilingArray tilingArray
11.8 years ago Du, Yang ▴ 10
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tilingArray getting started questions
GO Yeast tilingArray Starr GO Yeast tilingArray Starr
13.7 years ago Noah Dowell ▴ 410
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Help with Oligo Package: Extracting and Graphing
Transcription Normalization Yeast probe affy graph tilingArray oligo pdInfoBuilder Starr
updated 14.5 years ago by ▴ 430 • written 14.5 years ago by ▴ 410
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tilingArray: error message in function segment()
tilingArray tilingArray
15.2 years ago Hui Tang ▴ 20
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tilingArray problems
Normalization GO tilingArray Normalization GO tilingArray
15.5 years ago Wolfgang Huber ★ 13k
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TilingArray Normalization
Transcription Normalization probe tilingArray Transcription Normalization probe tilingArray
updated 15.5 years ago by ★ 13k • written 15.5 years ago by ▴ 90
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tilingArray problems
tilingArray tilingArray
15.5 years ago Anjan Purkayastha ▴ 90
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applicability of tilingArray package
Normalization Yeast affy tilingArray Normalization Yeast affy tilingArray
updated 15.6 years ago by ★ 13k • written 15.6 years ago by ▴ 50
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tilingArray- normalizeByReference
probe tilingArray probe tilingArray
15.6 years ago Anjan Purkayastha ▴ 90
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combining data from two R arrays
GO Survival annotate genefilter vsn tilingArray GO Survival annotate genefilter vsn
16.6 years ago Richard Harrison ▴ 70
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running time of snapCGH processCGH and runDNAcopy
aCGH Survival CGH annotate genefilter affy DNAcopy aCGH GLAD tilingArray snapCGH aCGH
updated 16.6 years ago by ▴ 230 • written 16.6 years ago by ▴ 110
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Chromosome 23 and 24 dropped after run snapCGH processCGH
aCGH Survival Cancer annotate genefilter affy DNAcopy aCGH GLAD tilingArray snapCGH
updated 16.6 years ago by ▴ 40 • written 16.6 years ago by ▴ 110
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Stuck with Yeast Tiling Array
tilingArray tilingArray
updated 16.7 years ago by ▴ 730 • written 16.7 years ago by ▴ 70
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Normalization in davidTiling demo
Normalization GO Survival Biobase genefilter geneplotter affy vsn PROcess tilingArray GO
updated 17.2 years ago by ★ 13k • written 17.2 years ago by ★ 1.3k
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Normalization in davidTiling demo
Normalization GO Survival genefilter geneplotter affy vsn tilingArray affyio GO Survival
updated 17.2 years ago by ★ 13k • written 17.2 years ago by ★ 1.3k
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Scripts to handle array CGH data files from NimbleGen
CGH tilingArray CGH tilingArray
updated 17.7 years ago by ▴ 40 • written 17.7 years ago by ▴ 140
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FW: Cannot restore saved data in .Rdata after loading tilingArray - object 'breakpoints' not found
Cancer Breast PROcess tilingArray snapCGH Cancer Breast PROcess tilingArray snapCGH
updated 17.7 years ago by ★ 13k • written 17.7 years ago by ▴ 310
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tiling/SNP microarrays
SNP Coverage tilingArray SNP Coverage tilingArray
updated 17.9 years ago by 21k • written 17.9 years ago by ▴ 10
20 results • Page 1 of 1
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Comment: DESeq2- Mysterious interaction suppresses DEGs by Michael Love 42k
We have some text about this particular question in the Frequently Asked Questions (FAQ) part of the software vignette.
Answer: How to run allelic imbalance in apeglm by Michael Love 42k
You can put 1 / 1 for the ratio when you are missing counts and then set the weight for that matrix cell to 1e-6. Let me know if that's …
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0
Got you. Thanks again for your comments.
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
Thanks so much for your comment. Yes, this makes sense to me, especially since the effect of the drug is subtle. But it raises a larger con…
Answer: ERROR; return code from pthread_create() is 22 by James W. MacDonald 65k
Seems OK to me. ``` > dat <- ReadAffy() > dat AffyBatch object size of arrays=744x744 features (20 kb) cdf=HG-U219 (49386 affyids) …
Votes
Comment: DESeq2- Mysterious interaction suppresses DEGs
Answer: DESeq2- Mysterious interaction suppresses DEGs
Answer: Subsetting RNAseq data | voomaByGroup()
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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