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Comment: Comment: ATACseqQC shiftGAlignmentsList() problem
3 months ago Ou, Jianhong ★ 1.3k
0
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0
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478
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Comment: Comment: ATACseqTFEA - preparebindingSites() for whole genome?
3 months ago Ou, Jianhong ★ 1.3k
0
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1
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478
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Comment: Comment: ATACseqTFEA - preparebindingSites() for whole genome?
4 months ago Ou, Jianhong ★ 1.3k
0
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1
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706
views
Answer: Answer: ATACseqQC shiftGAlignmentsList() problem
5 months ago Ou, Jianhong ★ 1.3k
0
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0
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706
views
Comment: Comment: ATACseqQC shiftGAlignmentsList() problem
5 months ago Ou, Jianhong ★ 1.3k
0
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1
reply
706
views
Comment: Comment: ATACseqQC shiftGAlignmentsList() problem
5 months ago Ou, Jianhong ★ 1.3k
0
votes
1
reply
478
views
Answer: Answer: ATACseqTFEA - preparebindingSites() for whole genome?
6 months ago Ou, Jianhong ★ 1.3k
0
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0
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305
views
Comment: Comment: Incorrect display of Y-axis
6 months ago Ou, Jianhong ★ 1.3k
2
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2
replies
1.7k
views
Answer: Answer: How to apply ChIPpeakAnno to your Granger object to annotate the peaks?
13 months ago Ou, Jianhong ★ 1.3k
0
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0
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597
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Comment: Comment: Error in ATACseqQC bamQC analysis
16 months ago Ou, Jianhong ★ 1.3k
1
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0
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629
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Answer: Answer: Interpretation of $vennCounts output "Others"
17 months ago Ou, Jianhong ★ 1.3k
0
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0
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729
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Comment: Comment: AssignChromosomeRegion not working in Rstudio 4.2
2.0 years ago Ou, Jianhong ★ 1.3k
1
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1
reply
863
views
Comment: Comment: motifStack Plotting the correct data positions on x axis
2.2 years ago Ou, Jianhong ★ 1.3k
2
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1
reply
863
views
Answer: Answer: motifStack Plotting the correct data positions on x axis
2.2 years ago Ou, Jianhong ★ 1.3k
1
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0
replies
928
views
Comment: Comment: trackViewer assigning track colors
2.3 years ago Ou, Jianhong ★ 1.3k
0
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0
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2.2k
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Comment: Comment: Problem converting a bed file to granges using togranges chippeakanno
2.3 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.4k
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Comment: Comment: TSSEscore function in ATACseqQC package
2.3 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.4k
views
Comment: Comment: TSSEscore function in ATACseqQC package
2.3 years ago Ou, Jianhong ★ 1.3k
1
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2
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1.4k
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Comment: Comment: TSSEscore function in ATACseqQC package
2.3 years ago Ou, Jianhong ★ 1.3k
0
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0
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2.1k
views
Answer: Answer: Error in .order_seqlevels(chrom_sizes[, "chrom"])
2.6 years ago Ou, Jianhong ★ 1.3k
1
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1
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1.3k
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Answer: Answer: trackViewer peak visualization
2.6 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.8k
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Answer: Answer: trackViewer bigWig smoothing
2.6 years ago Ou, Jianhong ★ 1.3k
0
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1
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991
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Answer: Answer: trackViewer font
2.6 years ago Ou, Jianhong ★ 1.3k
0
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1
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723
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Hard coding in DiffBind DBA.R line 968
DiffBind
updated 3.0 years ago by ★ 5.2k • written 3.0 years ago by ★ 1.3k
0
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0
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3.6k
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Comment: Comment: No peak corresponding to the nucleosome-free regions is observed in Fragment siz
3.1 years ago Ou, Jianhong ★ 1.3k
0
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1
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3.6k
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Comment: Comment: No peak corresponding to the nucleosome-free regions is observed in Fragment siz
3.1 years ago Ou, Jianhong ★ 1.3k
1
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1
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1.0k
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Answer: Answer: ribosomeProfilingQC - countReads function - is it possible to consider library
3.2 years ago Ou, Jianhong ★ 1.3k
0
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1
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1.0k
views
Comment: Comment: ribosomeProfilingQC - countReads function - is it possible to consider library
3.2 years ago Ou, Jianhong ★ 1.3k
0
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0
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783
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Comment: Comment: trackViewer: File format detection
3.5 years ago Ou, Jianhong ★ 1.3k
0
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1
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783
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Answer: Answer: trackViewer: File format detection
3.5 years ago Ou, Jianhong ★ 1.3k
0
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1
reply
1.2k
views
Comment: C: How to use a fimo BED output as GRanges object in factorFootprints from ATACseqQ
3.7 years ago Ou, Jianhong ★ 1.3k
0
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1
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2.0k
views
Answer: A: ATACseqQC R package for QC scores (TSS, FRIP, NFR, IDR)
3.8 years ago Ou, Jianhong ★ 1.3k
1
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0
replies
9.5k
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Answer: A: Interpreting TSS Enrichment Score Summary
3.8 years ago Ou, Jianhong ★ 1.3k
2
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1
reply
826
views
Comment: C: how to suppress makeVennDiagram plot
3.8 years ago Ou, Jianhong ★ 1.3k
0
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0
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986
views
Comment: C: Subsampling when adjusting the read start sites in the ATACseqQC guide
3.8 years ago Ou, Jianhong ★ 1.3k
1
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2
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986
views
Comment: C: Subsampling when adjusting the read start sites in the ATACseqQC guide
3.8 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
1.5k
views
Comment: C: ATACSeqQC - error when splitting files using mm10
4.0 years ago Ou, Jianhong ★ 1.3k
0
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1
reply
1.5k
views
Comment: C: ATACSeqQC - error when splitting files using mm10
4.0 years ago Ou, Jianhong ★ 1.3k
0
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1
reply
1.5k
views
Comment: C: ATACSeqQC - error when splitting files using mm10
4.0 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
2.4k
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Comment: C: ATAC-QC shiftGAlignmentsList function
4.1 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
473
views
Comment: C: ATACseqQC and Rsamtools scanBam
4.1 years ago Ou, Jianhong ★ 1.3k
1
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0
replies
467
views
Answer: C: Virus found in GeneNetworkBuilder_1.28.1.tar.gz
4.3 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
818
views
Comment: C: TrackViewer Vignette Err: attr must be a slot name of xscale object
4.5 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
1.1k
views
Comment: C: trackViewer: how to make lolliplots for methylation data
4.6 years ago Ou, Jianhong ★ 1.3k
1
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1
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1.1k
views
Comment: C: trackViewer: how to make lolliplots for methylation data
4.6 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
647
views
Answer: A: Can I use trackViewer to generate methylation lolliops with my own gene models a
4.6 years ago Ou, Jianhong ★ 1.3k
0
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1
reply
2.0k
views
Answer: A: Error in running ATACseqQC
4.6 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
1.7k
views
Comment: C: ATACseqQC installation fails at shiny step
4.7 years ago Ou, Jianhong ★ 1.3k
0
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1
reply
1.7k
views
Comment: C: ATACseqQC installation fails at shiny step
4.7 years ago Ou, Jianhong ★ 1.3k
0
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0
replies
1.2k
views
Comment: C: How to change the size of yaxis in motifstack
4.8 years ago Ou, Jianhong ★ 1.3k
227 results • Page 1 of 5
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