Michael Stadler • 340
Status: New
Handle: @michael-stadler-5887
Reputation: 340
Joined: 7.9 years ago
Twitter: @mbstadler
Google Scholar: UAcx9iMAAAAJ
Last seen: 6 days ago
Location: Switzerland

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Answer: Answer: Error when running qAlign from QuasR package for sequence alignment & QC.
19 days ago
Michael Stadler • 340
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Answer: A: Using pre-indexed genome files for alignment of RNA-Seq reads via Rhisat2
4 months ago
Michael Stadler • 340
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74
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Answer: A: RNAseq analysis of organism not included in BSgenome using QuasR
4 months ago
Michael Stadler • 340
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84
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Answer: A: using qCount from the QuasR package
7 months ago
Michael Stadler • 340
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135
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Comment: C: QuasR qQCReport error
13 months ago
Michael Stadler • 340
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144
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Answer: A: QuasR::qAlign: how to specify maximum allowed number of mismatches and output al
14 months ago
Michael Stadler • 340
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393
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Answer: A: Rbowtie fails to compile using spack with "error: reference to Byte is ambiguous
14 months ago
Michael Stadler • 340
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393
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Comment: C: Rbowtie fails to compile using spack with "error: reference to Byte is ambiguous
21 months ago
Michael Stadler • 340
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393
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Comment: C: Rbowtie fails to compile using spack with "error: reference to Byte is ambiguous
21 months ago
Michael Stadler • 340
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388
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Comment: C: qCount with a GRangesList is very slow
23 months ago
Michael Stadler • 340
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Comment: C: qQCReport Missing Plots Described in Documentation
23 months ago
Michael Stadler • 340
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1.2k
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Answer: A: QuasR: Loading BAM files as start point
5.5 years ago
Michael Stadler • 340
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1.2k
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Answer: A: QuasR: Loading BAM files as start point
5.5 years ago
Michael Stadler • 340
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949
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Answer: A: QuasR question
6.5 years ago
Michael Stadler • 340
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949
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QuasR question
QuasR
6.5 years ago
Michael Stadler • 340 • updated 6.5 years ago
Daniel Soronellas • 10
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980
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Comment: C: Rbowtie - compilation error
6.7 years ago
Michael Stadler • 340
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980
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Answer: A: Rbowtie - compilation error
6.7 years ago
Michael Stadler • 340
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980
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Answer: A: Rbowtie - compilation error
6.7 years ago
Michael Stadler • 340
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1
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980
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Answer: A: Rbowtie - compilation error
6.7 years ago
Michael Stadler • 340
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677
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QuasR for miRNA
miRNA QuasR miRNA QuasR
6.8 years ago
Michael Stadler • 340
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1.1k
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Comment: C: QuasR: problem accessing BSgenome.Rnorvegicus.UCSC.rn5
7.0 years ago
Michael Stadler • 340
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560
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A question for QuasR::qQCReport
BSgenome BSgenome BSgenome BSgenome
7.3 years ago
Michael Stadler • 340
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963
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Answer: A: Summarization by gene or exon or transcript
7.3 years ago
Michael Stadler • 340
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963
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Summarization by gene or exon or transcript
QuasR QuasR
7.3 years ago
Michael Stadler • 340
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1.1k
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Create a sample file /tab delimited file in QuasR
BSgenome convert BSgenome genomes QuasR BSgenome convert BSgenome genomes QuasR
7.3 years ago
Michael Stadler • 340
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1.5k
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Comment: C: QuasR on Linux Cluster
7.3 years ago
Michael Stadler • 340
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1.5k
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Comment: C: QuasR on Linux Cluster
7.3 years ago
Michael Stadler • 340
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1.5k
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Comment: C: QuasR on Linux Cluster
7.4 years ago
Michael Stadler • 340
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1.5k
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Answer: A: QuasR on Linux Cluster
7.4 years ago
Michael Stadler • 340
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Comment: C: plot methylation figure for end analysis
7.4 years ago
Michael Stadler • 340
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Answer: A: Bioconductor: CPM and log(CPM) values in EdgeR does not match
7.6 years ago
Michael Stadler • 340
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Comment: C: Trimming of partial adaptor sequences
7.6 years ago
Michael Stadler • 340
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Comment: C: QuasR: how to use an indexed reference genome?
7.8 years ago
Michael Stadler • 340
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Comment: C: QuasR: how to use an indexed reference genome?
7.8 years ago
Michael Stadler • 340
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1
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1.8k
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Answer: A: QuasR: how to use an indexed reference genome?
7.8 years ago
Michael Stadler • 340
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1.8k
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Answer: A: QuasR: how to use an indexed reference genome?
7.8 years ago
Michael Stadler • 340
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1
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1.2k
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Answer: A: Advice on reading big BED/BAM and ChIP-seq quality control
7.8 years ago
Michael Stadler • 340
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852
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Comment: C: QuasR special case alignment
7.8 years ago
Michael Stadler • 340
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852
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QuasR special case alignment
Alignment genomes QuasR Alignment genomes QuasR
7.8 years ago
Michael Stadler • 340 • updated 7.8 years ago
Ugo Borello • 340
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655
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Answer: A: QuasR special case alignment
7.8 years ago
Michael Stadler • 340
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1.3k
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multiple threads on QuasR
Alignment GLAD QuasR Alignment GLAD QuasR
7.9 years ago • updated 7.8 years ago
Michael Stadler • 340
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1.3k
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Answer: A: multiple threads on QuasR
7.8 years ago
Michael Stadler • 340
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