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5 years, 1 month ago
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Yeast org.Sc.sgd.db lacks SYMBOL - should it have one? - how to make it interoperate with clusterProfiler in its absence?
6 years ago
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emacs org mode html export using jQuery DataTables (WAS: new package for generating interactive HTML reports)
7 years, 8 months ago
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HowTo? Provide a different fill color for each rectangle in an Gviz AnnotationTrack ?
10 years, 2 months ago
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subsetting SummarizedExperiments - a proposal (or a hack?)
10 years, 2 months ago
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subsetting SummarizedExperiments - a proposal (or a hack?)
10 years, 5 months ago
United States
autoplot transcriptDb error with some regions
10 years, 8 months ago
United States
BUG? when setting mcols of a GRanges to a DataFrame one of whose columns is an ordered factor
11 years, 1 month ago
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[Rd] enabling reproducible research & R package management & install.package.version & BiocLite
11 years, 1 month ago
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enabling reproducible research & R package management & install.package.version & BiocLite
11 years, 10 months ago
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[Engineers for ensemblgenomes.org #251937] BioMart data anomaly: for some transcripts, the cds cumulative length inferred from the exon and UTR info doesn't match the "cds_length"
12 years ago
United States
rtracklayer proposal for ISSUE: import.gff3 asRangedData=FALSE fails when strand is '.'
12 years ago
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[Hinxton #251937] RE: GenomicFeatures::makeTranscriptDbFromBiomart - BioMart data anomaly: for some transcripts, the cds cumulative length inferred from the exon and UTR info doesn
12 years, 2 months ago
United States
[Hinxton #251937] RE: GenomicFeatures::makeTranscriptDbFromBiomart - BioMart data anomaly: for some transcripts, the cds cumulative length inferred from the exon and UTR info doesn
12 years, 2 months ago
United States
BioMart data anomaly: for some transcripts, the cds cumulative length inferred from the exon and UTR info doesn't match the "cds_length" attribute from BioMart
12 years, 2 months ago
United States
GenomicFeatures::makeTranscriptDbFromBiomart - BioMart data anomaly: for some transcripts, the cds cumulative length inferred from the exon and UTR info doesn't match the "cds_leng
12 years, 2 months ago
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error "Too many pushAbortHandlers, can only handle 11" while exporting bedGraph/bigWig using rtracklayer from Bioconductor
12 years, 2 months ago
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FW: GenomicFeatures::makeTranscriptDbFromBiomart - Error in callSuper(...) : could not find function "initRefFields"
12 years, 2 months ago
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GenomicFeatures::makeTranscriptDbFromBiomart - Error in callSuper(...) : could not find function "initRefFields"
12 years, 3 months ago
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GenomicFeatures makeTranscriptDbFromBiomart failure
12 years, 4 months ago
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biomaRt access to ensemble genomes 11 fungi_mart_11
12 years, 7 months ago
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13 years, 2 months ago
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extending GenomicFeatures to makeTranscriptDbFrom other sources (i.e. GFF3)
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