Hi I am using Salmon to quantify transcripts (RNA seq data). The Salmon jobs is hanging for one of sample. I would like to mention that I had concatenated the formward reads from different lanes and did the same for reverse reads which acted as an input to Salmon.

The job is running fine except for one case. Can someone suggest better way of doing this.

Tanya

Salmon is not a Bioconductor software package, and this support site is really only for getting support for Bioconductor packages. See the Salmon website for more details, help and where to post questions.