Dear all I am working on GeneR wich maybe partly overlap Biostring possibilities since its includes a lot of tools for sequence manipulation. This package allows to look for oligomer in huge sequences (i.e: a whole chromosome) and we are currently working on the windows version. Regards, Antoine Lucas Le Thu, 27 Oct 2005 17:03:54 -0700 Robert Gentleman <rgentlem at="" fhcrc.org=""> a ?crit: > Hi Marcus, > Yes, sort of, if you want to send me code, or discuss off line, > we are hoping to spend some time on new capabilities here over the > next few months. And I will (thought I already had) change the > maintainer info. > > Robert > > Marcus G. Daniels wrote: > > Hello, > > > > Does anyone know if Biostrings is being maintained? I see the version > > number bumped between Bioconductor releases, but the maintainer's > > (Saikat Debroy) e-mail bounces at the University of Wisconsin. > > > > One thing I'd like to add support for matching amino acid strings. It > > seems to be partially implemented, so I wonder if anyone else has a > > later version than is to be included in 1.8. > > > > Alternatively, if anyone knows of an R package that already has the > > capability to do high-speed matching of multiple strings (with an amino > > acid alphabet), I'd appreciate the pointer. > > > > Thanks! > > > > _______________________________________________ > > Bioconductor mailing list > > Bioconductor at stat.math.ethz.ch > > https://stat.ethz.ch/mailman/listinfo/bioconductor > > > > -- > Robert Gentleman, PhD > Program in Computational Biology > Division of Public Health Sciences > Fred Hutchinson Cancer Research Center > 1100 Fairview Ave. N, M2-B876 > PO Box 19024 > Seattle, Washington 98109-1024 > 206-667-7700 > rgentlem at fhcrc.org > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > -- Antoine Lucas Centre de g?n?tique Mol?culaire, CNRS 91198 Gif sur Yvette Cedex Tel: (33)1 69 82 38 89 Fax: (33)1 69 82 38 77