How to output list of genes which belong to specific GO(Gene Ontology)?
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@karagozeylul-16323
Last seen 6.5 years ago

Hi,

I am using this workflow exactly: https://www.bioconductor.org/packages/release/workflows/vignettes/RnaSeqGeneEdgeRQL/inst/doc/edgeRQL.html  

But I want to display the genes which belong to specific GO(Gene Ontology). How can display the list of (for example up regulated) genes for a specific GO?

Thank you!

Gene ontology part looks like this:

                                         Term Ont    N  Up Down     P.Up   P.Down
GO:0000278                      mitotic cell cycle  BP  721 119    1 1.22e-16 1.00e+00 

 

 

 

 

 

 

gene ontology rnaseq • 843 views
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