Entering edit mode
Khan, Sohail
▴
490
@khan-sohail-1137
Last seen 10.2 years ago
Dear List,
I have performed a time course analysis using limma, as described in
"Bioinformatics and Computational Biology Solutions ........".
How can I get a list of differentially expressed genes? I've tried
the code below:
sel.dif<-p.adjust(fit2$F.p.vlaue,method="fdr") <0.05
This produces a logical vector, right?. I would like a table of
differentially expressed genes with p vales etc. Sorry, if I missed
this in the limma user's guide. Thanks for any suggestions.
Sohail Khan
Scientific Programmer
COLD SPRING HARBOR LABORATORY
Genome Research Center
500 Sunnyside Boulevard
Woodbury, NY 11797
(516)422-4076