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topijush
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@topijush-14730
Last seen 4.1 years ago
Please help me to use the function named read.agiMicroRna(). Getting the error given below.
> library("AgiMicroRna")
> dd=AgiMicroRna:::read.agiMicroRna(targets.micro,
+ columns=list(TGS="gTotalGeneSignal",
+ TPS="gTotalProbeSignal",
+ meanS="gMeanSignal",
+ procS="gProcessedSignal"),
+ other.columns=list(IsGeneDetected="gIsGeneDetected",
+ IsSaturated="gIsSaturated",
+ IsFeatNonUnifOF="gIsFeatNonUnifOL",
+ IsFeatPopnOL="gIsFeatPopnOL",
+ BGKmd="gBGMedianSignal"),
+ annotation = c( "ControlType", "ProbeName","SystematicName"),
+ verbose=TRUE)
reading file 1 - 257015615988_1_1.txt
Error in `[.data.frame`(obj, , columns[[a]]) : undefined columns selected