Hi, We are trying to use BioC's plier package but I couldn't find any documentation to the package. My question is, with all the 'Model parameters' in the justPlier function, which parameters are often changed and which are mostly set, and their effects on the final values. Also, the old BioC searchable archive is no longer available - http://files.protsuggest.org/cgi-bin/biocond.cgi How do people do the search now? Thank you, Yiwen He NIH/CIT/BIMAS