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The Affymetrix page you where looking at has a link under Additional Support called Mapping 500K Sample Data Set - you can download .zipped HapMap data files from there. Mike Cariaso wrote: >A bit off topic, but hopefully the right audience. > >I'm trying to get some test data from the Affy Mapping 500K Array Set >https://www.affymetrix.com/support/technical/byproduct.affx?product=5 00k > >The only source I'm aware of is listed at >http://arrayconsortium.tgen.org/np2/navigateRepository.do > >however the actual link to ftp://arrayconsortium.tgen.org/SNP/ >doesn't seem to work for me. > >Is anyone aware of a source of I could use for some preliminary in- house tool development? >A handful of normal human samples would be ideal, but I'd be grateful for pointers to anything run on this platform. > > >-- >Mike Cariaso * Bioinformatics Software * http://www.cariaso.com > > > [[alternative HTML version deleted]] > >_______________________________________________ >Bioconductor mailing list >Bioconductor at stat.math.ethz.ch >https://stat.ethz.ch/mailman/listinfo/bioconductor >Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor > > > -- David Carter London Regional Genomics Centre Robarts Research Institute, Room 4.01 PO Box 5015, 100 Perth Drive London, Ontario, Canada, N6A 5K8 phone: 519-663-3253 fax: 519-663-3037 dcarter at robarts.ca http://www.lrgc.ca

There are 270 normal samples on the HapMap website, www.hapmap.org. -Ben > -----Original Message----- > From: bioconductor-bounces at stat.math.ethz.ch [mailto:bioconductor- > bounces at stat.math.ethz.ch] On Behalf Of Mike Cariaso > Sent: Friday, March 30, 2007 12:12 PM > To: bioconductor at stat.math.ethz.ch > Subject: [BioC] looking for Affy 500k snp chip data > > A bit off topic, but hopefully the right audience. > > I'm trying to get some test data from the Affy Mapping 500K Array Set > https://www.affymetrix.com/support/technical/byproduct.affx?product= 500k > > The only source I'm aware of is listed at > http://arrayconsortium.tgen.org/np2/navigateRepository.do > > however the actual link to ftp://arrayconsortium.tgen.org/SNP/ > doesn't seem to work for me. > > Is anyone aware of a source of I could use for some preliminary in- house > tool development? > A handful of normal human samples would be ideal, but I'd be grateful for > pointers to anything run on this platform. > > > -- > Mike Cariaso * Bioinformatics Software * http://www.cariaso.com > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor The information transmitted in this electronic communication is intended only for the person or entity to whom it is addressed and may contain confidential and/or privileged material. Any review, retransmission, dissemination or other use of or taking of any action in reliance upon this information by persons or entities other than the intended recipient is prohibited. If you received this information in error, please contact the Compliance HelpLine at 800-856-1983 and properly dispose of this information.