I put the fix in the release branch a couple of hours ago. It will be in the version 28 of 1.2 (when the build script will do it). L. On Wed, Jun 11, 2003 at 10:57:36PM -0400, Rafael A. Irizarry wrote: > this is a bug. > > the line > matplot(all.x, all.y, ylab=ylab, xlab=xlab, ...) > should be > matplot(all.x, all.y, ylab=ylab, xlab=xlab, type=type, ...) > > in the function plotDensity. > > thanks for the report. > > > On Wed, 11 Jun 2003, James MacDonald wrote: > > > Using the Win version of R 1.7.0 and Affy 1.2.14, I was able to modify > > the hist function to plot lines rather than numbers using a command like > > this > > > > hist(abatch, type="l", lty=1, lwd=2) > > > > Now with R 1.7.1beta and Affy 1.2.27, this doesn't replace the numbers > > with lines. I can sort of emulate the lines by cranking the number size > > down with cex=0.1, but I really prefer the lines for making clear > > plots. > > > > So, is this due to a change in Affy, or is this an R 1.7.1beta thing? > > If it is affy, is it still possible to draw lines rather than the > > numbers? > > > > TIA, > > > > Jim > > > > > > > > James W. MacDonald > > UMCCC Microarray Core Facility > > 1500 E. Medical Center Drive > > 7410 CCGC > > Ann Arbor MI 48109 > > 734-647-5623 > > > > _______________________________________________ > > Bioconductor mailing list > > Bioconductor@stat.math.ethz.ch > > https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor > > > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor -- -------------------------------------------------------------- currently at the National Yang-Ming University in Taipei, Taiwan -------------------------------------------------------------- Laurent Gautier CBS, Building 208, DTU PhD. Student DK-2800 Lyngby,Denmark tel: +45 45 25 24 89 http://www.cbs.dtu.dk/laurent