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Christoph Helma
▴
10
@christoph-helma-2428
Last seen 11.3 years ago
We are offering 2 positions for scientific programmers with a strong
background
in Bio- and Chemoinformatics, Data Mining, Toxicology and (Q)SAR
modelling.
The successful candidates will design, implement and test open source
software
for the EU projects Sens-it-iv www.sens-it-iv.eu) and OpenTox
www.opentox.org) using Ruby (on rails) as the main scripting
language and a
variety of external software packages, libraries and custom
developments for
problem specific tasks (e.g. Bioconductor/R for Bioinformatics/Data
Mining,
OpenBabel/CDK for Chemoinformatics, lazar for toxicity predictions,
...).
We expect efficient, independent and goal-oriented programming skills,
a
familarity with open source development procedures and the ability to
translate
life-science concepts into algorithms (and vice versa).
We offer a congenial working atmosphere in a small group with close
international collaborations and ample room to pursue your scientific
interests. The salary will follow the german (E13/BAT-IIA) scheme, and
the
positions are initially limited to the duration of the EU projects (3
years).
Please send a brief CV with a description of your scientific
background and a
summary of your programming experience by email to helma at in-
silico.de, if you
are interested in one of these positions (Deadline: October 31).
Christoph Helma == Freiburger Zentrum f. Datenanalyse u. Modellbildung
(FDM)
Brief description of the EU projects:
The Sens-it-iv project aims to develop new in vitro techniques for the
detection of allergenic effects, our group maintains the internal
database
(mainly toxicogenomics, -proteomics and -metabolomics data) as well as
data
mining facilities.
OpenTox will create an open source framework for predictive toxicology
with a
database backend, facilities for automated QSAR model development and
validation, a plug-in system for novel data mining and QSAR algorithms
and an
easy-to-use web interface for end-users.
