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This is a bug (which I seem to recall having seen before, so I don't know why it is still there, perhaps it was in another function). I have fixed it in the devel version. If you just want a quick fix you can call the function as tpmap2bpmap(tpmapname='x', bpmapname='y', verbose = as.integer(0)) Kasper On Nov 6, 2007, at 1:59 AM, Daniel Zak wrote: > Has anyone successfully used "tpmap2bpmap" in affxparser to create > a BPMAP from a TPMAP file? > > I successfully used the affxparser package to read in my BPMAP > and to write it out as a TPMAP. When I try to write the TPMAP out > back to a BPMAP, i get an error. The error is very upstream in > the code, as it doesnt matter whether the files I specify in the > command even exist. > > Here is my error: > >> tpmap2bpmap(tpmapname='x', bpmapname='y'); > > Error in tpmap2bpmap(tpmapname = "x", bpmapname = "y") : > INTEGER() can only be applied to a 'integer', not a 'double' > > > I'm using affxparser on a Windows machine under R2.5. > > Thanks > > __________________________________________________ > > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/ > gmane.science.biology.informatics.conductor