This is an automated message sent out weekly to report recent changes to Bioconductor packages. Please see the URL http://www.bioconductor.org/changelog.html for a complete history of changes. Unless otherwise noted, these changes apply to the developmental packages only. ---------------------------------------------------------------------- - 5 July 2003: limma - imported version 1.1.7 - support for much extra structure in RGList and MAList objects - representation of MArrayLM class reverts to list - support for marrayNorm and exprSet objects by lmFit - new function makeContrasts to construct contrast matrices - new function duplicateCorrelation - classifyTests now supports MArrayLM objects - new function classifyTests43 for simple t-stat thresholding - new functions vennCounts and vennDiagram for Venn diagram plots - update of LinearModels documentation to reflect changes 29 June 2003: limma - imported version 1.1.5 - subsetting methods for RGList and MAList objects. Bug fix for cbind method for RGLists.

This is an automated message sent out weekly to report recent changes to Bioconductor packages. Please see the URL http://www.bioconductor.org/changelog.html for a complete history of changes. Unless otherwise noted, these changes apply to the developmental packages only.

This is an automated message sent out weekly to report recent changes to Bioconductor packages. Please see the URL http://www.bioconductor.org/changelog.html for a complete history of changes. Unless otherwise noted, these changes apply to the developmental packages only. ---------------------------------------------------------------------- - 18 Jul 03: Biobase::createPackage now uses a proper template directory tree rather than just a collection of .R, .Rd etc. files; spiced up the example -- WH 13 Jul 03: RBGL significantly modified. R and cpp file sprawl eliminated, and c++ calls are sensitive to edgemode of incoming graphNEL more to come -- VJC

This is an automated message sent out weekly to report recent changes to Bioconductor packages. Please see the URL http://www.bioconductor.org/changelog.html for a complete history of changes. Unless otherwise noted, these changes apply to the developmental packages only.