Using a weight for Illumina data? (limma)
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Benno Puetz ▴ 10
@benno-puetz-2606
Last seen 11.3 years ago
As I have a lot of genes which show essentially no expression, I thought of using the Detection (or rather 1-detection) as weight in lmFit. As I have not found any mention of this yet, I wanted to ask for comments whether that would be reasonable. When subsequently using eBayes(), this would probably reduce the influence of the low variance in those genes? -- Benno P?tz Statistical Genetics Max-Planck-Institut of Psychiatry Tel.: +49-89-30622-222 Kraepelinstr. 10 Fax : +49-89-30622-601 80804 Munich, Germany
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