info on chunkwise analysis
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weiliang Qiu ▴ 60
@weiliang-qiu-2730
Last seen 10.3 years ago
Dear List, Do you happen to know whether there are R packages or tools to do chunkwise analysis for large snp data? i.e. not read whole data at once. Instead, read and analyze segement by segment. Many thanks! Weiliang
SNP SNP • 799 views
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@henrik-bengtsson-4333
Last seen 7 months ago
United States
The aroma.affymetrix package can analyze large Affymetrix data sets including Affymetrix SNP chip data. For more details, go to http://www.braju.com/R/aroma.affymetrix/. /Henrik On Tue, Apr 1, 2008 at 6:25 AM, weiliang Qiu <weiliang.qiu at="" gmail.com=""> wrote: > Dear List, > Do you happen to know whether there are R packages or tools to do > chunkwise analysis for large snp data? i.e. not read whole data at > once. Instead, read and analyze segement by segment. > > Many thanks! > > Weiliang > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >
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Dear Henrik, Thanks for the info! Yours Sincerely, Weiliang On Wed, Apr 2, 2008 at 12:14 AM, Henrik Bengtsson <hb at="" stat.berkeley.edu=""> wrote: > The aroma.affymetrix package can analyze large Affymetrix data sets > including Affymetrix SNP chip data. For more details, go to > http://www.braju.com/R/aroma.affymetrix/. > > /Henrik > > > > On Tue, Apr 1, 2008 at 6:25 AM, weiliang Qiu <weiliang.qiu at="" gmail.com=""> wrote: > > Dear List, > > Do you happen to know whether there are R packages or tools to do > > chunkwise analysis for large snp data? i.e. not read whole data at > > once. Instead, read and analyze segement by segment. > > > > Many thanks! > > > > Weiliang > > > > _______________________________________________ > > Bioconductor mailing list > > Bioconductor at stat.math.ethz.ch > > https://stat.ethz.ch/mailman/listinfo/bioconductor > > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor > > >
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