Hello everybody, I have a problem of understanding the results of the QC.stats. I got the idea of the gapdh and actin ratios but what about the Scale factors? Is there a possibility to see what thresholds the actual analysis is using. I know I can set them at will using the plot.qc.stats(x, sf.thresh = 3) option. But I wonder if it's possible to see what values it is using? THX, Assa Yeroslaviz [[alternative HTML version deleted]]