Entering edit mode
Leon Peshkin
▴
10
@leon-peshkin-3090
Last seen 10.6 years ago
Hi Pan,
I was wondering if you could help me resolve the issue with lumi
package,
I am able to load Illumina data with lumiR, but then when I try
background adjustment
it fails:
A0 <- lumiR("killme.txt", convertNuID =FALSE, inputAnnotation
=FALSE)
> B0 <- lumiB(A0,method='bgAdjust')
Error in `[.data.frame`(control, , sampleNames(lumiBatch)) :
undefined columns selected
-Leon
