Hello, I have used Limma for preprocessing and statistical analysis. I want to filter my gene list after the statistical analysis but before the FDR is applied. My analysis generates the table fit2. The fit2 table has the following headers: Coefficients df.residual sigma stdev.unscaled A mean S2.post t p.value lods F F.p.value Can you explain what the following mean: stdev.unscaled, lods, s2.post, Amean, coefficients and F.p.value mean? If I wanted to filter out genes by variance what would be the best way to go? Sally [[alternative HTML version deleted]]