Hi, No I wasn't seeing anything different. What I was after was the new KEGG.db/org.Hs.eg.db because I was finding when using KEGGSOAP that some of the KEGG pathways IDs found in the annotation files were non- existent via KEGGSOAP and had in fact changed ID (based on the name). As the new release is out soon I will just wait or find another way round it. Many thanks Dan Robert Gentleman wrote: > Hi Daniel, > The situation right now is a bit different than normal, since we are in those > few days between R's release and bioc's. > R is now at 2.9, but for bioc that is still essentially devel for bioc (until > the 21st, when it will be release; and even so, we won't be updating annotation > immediately on release so the two will be the same, probably till the end of May > or so). So using biocLite will get that for you. Are you seeing something different? > > In general, we strongly advise against mixing of devel and release for any > packages (and especially for annotation packages). > > best wishes > Robert > > > Daniel Brewer wrote: >> I should have mentioned that I am running R 2.9 >> >> ----- >> >> Hi, >> >> I would like to use the latest development KEGG.db for something. DOes >> anyone know how to install it? I would really like just that one >> package, but can cope with the development version if necessary. It >> would just save some work converting from old KEGG IDs to new. >> >> Dan >> > -- ************************************************************** Daniel Brewer, Ph.D. Institute of Cancer Research Molecular Carcinogenesis MUCRC 15 Cotswold Road Sutton, Surrey SM2 5NG United Kingdom Tel: +44 (0) 20 8722 4109 ************************************************************** The Institute of Cancer Research: Royal Cancer Hospital, a charitable Company Limited by Guarantee, Registered in England under Company No. 534147 with its Registered Office at 123 Old Brompton Road, London SW7 3RP. This e-mail message is confidential and for use by the a...{{dropped:2}}