Install issues
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@kasper-daniel-hansen-459
Last seen 10.2 years ago
I have some issues with installing the development version of Bioconductor under R-1.8.0 for Windows. It is a completely clean install and I do >getBioC("all", relLevel="devel") It gets reposTools and lists all packages as suitable for updating. Immediately afterwards it exits with Synching your local package management information ... Error in repURL(replisting(object), pos) : subscript out of bounds Doing a >install.packages2("Biobase") results in exactly the same error message. Has something changes with install.packages2? Because I did exactly the same yesterday (with success). -- Kasper Daniel Hansen, Research Assistent Department of Biostatistics, University of Copenhagen
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@kasper-daniel-hansen-459
Last seen 10.2 years ago
On Wednesday 22 October 2003 14:37, you wrote: > Thanks Kasper, > seems like the package building went awry last night, Ok. I've just been informed that the same problems happens with the MacOS build, so it does not seem to be platform related. -- Kasper Daniel Hansen, Research Assistent Department of Biostatistics, University of Copenhagen
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Jeff Gentry ★ 3.9k
@jeff-gentry-12
Last seen 10.2 years ago
> results in exactly the same error message. Has something changes with > install.packages2? Because I did exactly the same yesterday (with success). Very sorry about this. The machine that runs the nightly builds ran out of disk space which caused some of the repository control files to not be properly generated. We're actually instituting a new build system today that would have caught this problem, unfortunately we are a day late with this. I believe that everything is back in working order, if anyone encounters further problems, let me know. -J
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