export contrast results in OneChannelGUI
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@javier-perez-florido-3121
Last seen 6.8 years ago
Dear list, I would like to know if it is possible to export to excel files the result of a contrast (limma) using OneChannelGUI. I only could export normalized data, but not all the values given by limma (p-value, M, B, etc). Thanks, Javier
limma oneChannelGUI limma oneChannelGUI • 1.1k views
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rcaloger ▴ 500
@rcaloger-1888
Last seen 9.9 years ago
European Union
>Dear list, >I would like to know if it is possible to export to excel files the >result of a contrast (limma) using OneChannelGUI. I only could export >normalized data, but not all the values given by limma (p-value, M, B, etc). >Thanks, >Javier Dear Javier, You cannot export the limma results using the graphical interface. I will make an extra function to extract those data from the graphical interface. In the mean time, you can extract them from the list in the affylmGUIenvironment environment: affylmGUIenvironment$ContrastParameterizationList Cheers Raffaele -- ---------------------------------------- Prof. Raffaele A. Calogero Bioinformatics and Genomics Unit Dipartimento di Scienze Cliniche e Biologiche c/o Az. Ospedaliera S. Luigi Regione Gonzole 10, Orbassano 10043 Torino tel. ++39 0116705417 Lab. ++39 0116705408 Fax ++39 0119038639 Mobile ++39 3333827080 email: raffaele.calogero at unito.it raffaele[dot]calogero[at]gmail[dot]com www: http://www.bioinformatica.unito.it Info: http://publicationslist.org/raffaele.calogero
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