Very useful for finding packages/functions on various topics are the task views pages for R and BioC: R: http://cran.at.r-project.org/web/views/ Task views on clustering http://cran.at.r-project.org/web/views/Cluster.html BioC: http://www.bioconductor.org/packages/release/Software.html On Wed, Apr 14, 2010 at 05:53:49AM -0400, Sean Davis wrote: > On Tue, Apr 13, 2010 at 11:27 PM, Rohit Farmer <rohit.farmer at="" gmail.com=""> wrote: > > Hello everyone ... > > > > I just wanted to know what are the different cluster methods available > > in bioconductor apart from K-means and hierarchical clustering and > > what are the libraries can be used for the same purpose .... I am > > using affymetrix data > > > > Hi, Rohit. > > This is a question that you can answer better yourself than we can. > To find out what is available on your system (installed), try: > > help.search('clustering') > > If that isn't satisfying, try: > > RSiteSearch('clustering',restrict='functions',matchesPerPage=100) > > This list will include functions in packages perhaps not even > installed locally. You can then install and test as you see fit. The > vast majority of these clustering methods are not specific to gene > expression data. > > Sean > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >