Hi, the Starr vignette on page 7 says: "Besides this normalization method, there are e.g. median rank percentile , scale, quantile, vsn, MAT and some others available." Which method provides MAT normalization? "normalize.Probes()" does not according to its help page. Thanks you, Hans-Ulrich -- Hans-Ulrich Klein Department of Medical Informatics and Biomathematics University of M?nster Domagkstrasse 9 48149 M?nster, Germany Tel.: +49 (0)251 83-58405

Perhaps you should look at rMAT. Raphael Sent from my iPhone On May 6, 2010, at 3:29 AM, Hans-Ulrich Klein <h.klein at="" uni-="" muenster.de=""> wrote: > Hi, > > the Starr vignette on page 7 says: "Besides this normalization > method, there are e.g. median rank percentile , scale, quantile, > vsn, MAT and some others available." Which method provides MAT > normalization? "normalize.Probes()" does not according to its help > page. > > Thanks you, > Hans-Ulrich > > > > -- > > Hans-Ulrich Klein > Department of Medical Informatics and Biomathematics > University of M?nster > Domagkstrasse 9 > 48149 M?nster, Germany > Tel.: +49 (0)251 83-58405 > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor