I read the paper by Kawahara et al, 2007 in advance of posting my question. It seems to me (I am not a biologist) that the articlle explains the discovery and implications of edited miRNAs ... There is also a nice picture. But I cannot read out any sequence. Maura -----Messaggio originale----- Da: Heidi Dvinge [mailto:heidi@ebi.ac.uk] Inviato: mar 18/05/2010 15.47 A: mauede@alice.it Cc: Bioconductor List Oggetto: Re: [BioC] Redirection of Silencing Targets by Adenosine-to- Inosine Editing of miRNAs Dear Maura, your best bet here is probably the article that the data in TarBase was taken from. There's a reference for each entry; you can check those manually. Best \Heidi On 18 May 2010, at 14:38, <mauede@alice.it> <mauede@alice.it> wrote: > TarBase contains some miRNAs that have undergone the biological > editing process. > No sequence, though, is available for such "transformed" miRNAs. > I wonder whether the sequences for such miRNAs are stored in some > database. > > Thank you in advance for any suggestion. > Maura > > > tutti i telefonini TIM! > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/ > gmane.science.biology.informatics.conductor tutti i telefonini TIM! [[alternative HTML version deleted]]

On Tue, May 18, 2010 at 11:04 AM, <mauede@alice.it> wrote: > I read the paper by Kawahara et al, 2007 in advance of posting my question. > It seems to me (I am not a biologist) that the articlle explains the > discovery and > implications of edited miRNAs ... There is also a nice picture. But I > cannot read out any > sequence. > > Hi, Maura. You could write to the author of that reference if the paper is unclear. Sean > -----Messaggio originale----- > Da: Heidi Dvinge [mailto:heidi@ebi.ac.uk] > Inviato: mar 18/05/2010 15.47 > A: mauede@alice.it > Cc: Bioconductor List > Oggetto: Re: [BioC] Redirection of Silencing Targets by > Adenosine-to-Inosine Editing of miRNAs > > Dear Maura, > > your best bet here is probably the article that the data in TarBase > was taken from. There's a reference for each entry; you can check > those manually. > > Best > \Heidi > > On 18 May 2010, at 14:38, <mauede@alice.it> <mauede@alice.it> wrote: > > > TarBase contains some miRNAs that have undergone the biological > > editing process. > > No sequence, though, is available for such "transformed" miRNAs. > > I wonder whether the sequences for such miRNAs are stored in some > > database. > > > > Thank you in advance for any suggestion. > > Maura > > > > > > tutti i telefonini TIM! > > > > > > [[alternative HTML version deleted]] > > > > _______________________________________________ > > Bioconductor mailing list > > Bioconductor@stat.math.ethz.ch > > https://stat.ethz.ch/mailman/listinfo/bioconductor > > Search the archives: http://news.gmane.org/ > > gmane.science.biology.informatics.conductor > > > > > > tutti i telefonini TIM! > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > [[alternative HTML version deleted]]