Question

Mining expression data

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Radhouane Aniba ▴ 240

@radhouane-aniba-4409

Last seen 8.5 years ago

Hi BioC, Is there any methode or package that allow to mine for newly generated expression data given a genome tax ID or name ? Kind of a package that looks for expression data in databases or repositories ? Regards Rad -- [[alternative HTML version deleted]]

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ADD COMMENT • link updated 13.9 years ago by Sean Davis 21k • written 13.9 years ago by Radhouane Aniba ▴ 240

score 0 · Answer 1 · 2010-12-21

On Tue, Dec 21, 2010 at 8:03 AM, Radhouane Aniba <aradwen@gmail.com> wrote: > Hi BioC, > > Is there any methode or package that allow to mine for newly generated > expression data given a genome tax ID or name ? Kind of a package that > looks > for expression data in databases or repositories ? > Hi, Rad. For finding datasets, see the GEOmetadb package. For quickly importing data from GEO and ArrayExpress, see the GEOquery and ArrayExpress packages, respectively. Sean [[alternative HTML version deleted]]