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Hajar Hassani Lahsinoui
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120
@hajar-hassani-lahsinoui-4281
Last seen 10.3 years ago
Hi everyone,
I tried to read beadarry data in R with backgroundMethod="none". For
some reason it still gives me the array's with a background
correction. See below. Does this mean my "raw data" has allready been
background corrected? I couldn't find it in the report.
Thanks,
Hajar
BLData=readIllumina(arrayNames=array.namen,backgroundMethod="none",nor
malizeMethod="Quantile",useImages=F)
'useImages=FALSE': please check that the 'singleChannel'
argument is appropriate for your data set
Found 24 arrays
Reading raw data from ./5513091009_A_perBeadFile.txt
Reading locally background corrected intensities
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