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Francesco Mancuso
▴
110
@francesco-mancuso-4483
Last seen 10.0 years ago
Dear list,
I am using the tool VanillaICE in order to find regions of Loss of
Homozigosity comparing Normal versus Tumor cells.
I cannot understand in the results what "state" indicates and how I
have
to consider the LLR value. The vignette does not give an exhaustive
explanation.
Could you explain me it or suggest where I can find these info?
Many thanks!
Francesco
--
*Francesco Mattia Mancuso*
Bioinformatician
- Bioinformatics Core Facility
- Proteomics Core Facility
CRG-Centre for Genomic Regulation (Room 439)
C/ Dr. Aiguader, 88 (Edif. PRBB)
08003 Barcelona, Spain
Mail: francesco.mancuso@crg.eu <mailto:francesco.mancuso@crg.eu>
Phone: +34 933160202
http://www.crg.es/bioinformatics_unit
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