Entering edit mode
Wendy Qiao
▴
360
@wendy-qiao-4501
Last seen 10.3 years ago
Hi all,
I want to use GOStats for gene set enrichment with the GOslim
collection.
I find on the GO website that the generic GO slim collection is in the
OBO
format. I am trying to convert the OBOCollection to a gene set
collection
so I can use the GSEAGOHyperGparams function for GSEA. After hours
trial
and error, I still don't figure out how to convert create the
genesetcollection from obocollection. Could anybody please help? Any
advice
is appreciated. Thank you!
Wendy
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